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Report for CCDS35992.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35992.1 Public Mus musculus 10 Pias4 23 108 98 CCDS HistoryNCBI Gene:59004Re-query CCDS DB by CCDS ID:35992.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 35992.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000005064.13 ENSMUSP00000005064.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000005064.13Link to Ensembl Protein Viewer:ENSMUSP00000005064.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000005064Re-query CCDS DB by Protein ID:ENSMUSP00000005064
Original member Current member NCBI NM_021501.4 NP_067476.2 Accepted alive Link to Nucleotide Sequence:NM_021501.4Link to Protein Sequence:NP_067476.2Re-query CCDS DB by Nucleotide ID:NM_021501Re-query CCDS DB by Protein ID:NP_067476Link to BLAST:NP_067476.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067476.2 507 Q9JM05 507 100% 0 0

Chromosomal Locations for CCDS 35992.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 81154101 81154372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81154448 81154578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81155591 81155751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81155833 81155906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81157012 81157117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81157227 81157355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81157437 81157527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81157651 81157692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81157933 81158017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81163785 81164190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81167685 81167711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1524 nt):
ATGGCGGCAGAGCTGGTGGAGGCCAAAAACATGGTGATGAGCTTCCGAGTATCAGACCTGCAGATGCTGC
TGGGCTTTGTAGGCCGGAGCAAGAGTGGGCTGAAGCACGAACTGGTGACCAGGGCCTTGCAGCTGGTGCA
GTTCGACTGTAGCCCAGAGCTTTTCAAGAAGATCAAAGAGCTGTATGAGACTCGCTATGCCAAGAAGAGT
GCAGAGCCCGGCCCACAGGCACCACGGCCCCTGGATCCCCTGGCACTACACTCCATGCCCAGGACTCCCC
TGTCAGGGCCCACCGTGGACTACCCCGTGCTGTACGGGAAGTACTTGAATGGACTGGGGCGCCTGCCCAC
CAAGACCCTTAAGCCGGAGGTACGCCTGGTTAAGCTCCCCTTCTTCAACATGCTGGACGAATTGCTGAAG
CCCACTGAACTGGTCCCACAGAGTGCAGAGAAGCTGCAAGAGAGCCCATGCATCTTCGCGCTAACACCTC
GGCAGGTGGAGATGATCCGCAACTCCAGGGAGCTGCAGCCTGGAGTGAAAGCTGTGCAGGTGGTGCTGAG
GATCTGTTACTCTGATACCAGCTGTCCGCAGGAGGACCAATACCCACCCAACATCGCTGTGAAGGTCAAC
CACAGCTACTGCTCAGTGCCGGGCTACTATCCCTCCAACAAGCCTGGTGTGGAACCTAAGAGGCCCTGCC
GCCCCATCAACCTTACCCACCTCATGTATCTGTCCTCGGCCACCAACCGCATTACTGTCACCTGGGGCAA
CTATGGCAAGAGCTACTCTGTGGCTTTGTACCTGGTGCGACAGCTGACCTCCTCAGACCTGCTACAGAGG
TTGAAGACGATTGGGGTGAAGCATCCTGAGCTGTGCAAGGCTTTGGTCAAGGAGAAGCTTCGCCTAGACC
CCGACAGCGAGATCGCCACTACCGGAGTGCGAGTGTCCCTCATCTGCCCACTGGTGAAGATGCGCCTCTC
GGTGCCCTGCCGTGCAGAGACCTGCGCACACCTGCAGTGCTTTGATGCTGTGTTCTACCTGCAAATGAAT
GAGAAGAAGCCCACCTGGATGTGCCCTGTGTGTGACAAGCCTGCAGCCTATGACCAGCTCATCATAGATG
GGCTGCTGTCGAAGATCCTGAGTGAGTGTGAGGGCGCGGATGAGATTGAGTTCCTGGCGGAAGGCTCATG
GCGTCCAATCCGTGCAGAGAAGGAGCCAAGCTGCAGCCCACAGGGCCCCATCCTGGTGCTAGGCACCTCG
GACGCCAATGGGCTCGCACCAGCCTCCAGCACCCCCGGTATAGGCAGTGGCCTGAGTGGCCCAGGCAGCG
CCGGCAGCGGTGCGGGGGCAGCAGGCAGCCTGGAGAATGGCAAGACGGGAGCCGACGTGGTGGACCTCAC
ACTGGACAGCTCGTCGTCCTCGGAAGATGAAGATGAGGACGAGGACGACGATGAGGACGAGGACGAGGGC
CCCCGGCCGAAGCGCCGCTGCCCGTTCCAGAAAGGCCTGGTGCCCGCGTGCTGA

Translation (507 aa):
MAAELVEAKNMVMSFRVSDLQMLLGFVGRSKSGLKHELVTRALQLVQFDCSPELFKKIKELYETRYAKKS
AEPGPQAPRPLDPLALHSMPRTPLSGPTVDYPVLYGKYLNGLGRLPTKTLKPEVRLVKLPFFNMLDELLK
PTELVPQSAEKLQESPCIFALTPRQVEMIRNSRELQPGVKAVQVVLRICYSDTSCPQEDQYPPNIAVKVN
HSYCSVPGYYPSNKPGVEPKRPCRPINLTHLMYLSSATNRITVTWGNYGKSYSVALYLVRQLTSSDLLQR
LKTIGVKHPELCKALVKEKLRLDPDSEIATTGVRVSLICPLVKMRLSVPCRAETCAHLQCFDAVFYLQMN
EKKPTWMCPVCDKPAAYDQLIIDGLLSKILSECEGADEIEFLAEGSWRPIRAEKEPSCSPQGPILVLGTS
DANGLAPASSTPGIGSGLSGPGSAGSGAGAAGSLENGKTGADVVDLTLDSSSSSEDEDEDEDDDEDEDEG
PRPKRRCPFQKGLVPAC


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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