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Report for CCDS2419.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2419.1 Public Homo sapiens 2 BCS1L 24 110 108 CCDS HistoryNCBI Gene:617Re-query CCDS DB by CCDS ID:2419.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2419.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359273.8 ENSP00000352219.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000359273.8Link to Ensembl Protein Viewer:ENSP00000352219.3Re-query CCDS DB by Nucleotide ID:ENST00000359273Re-query CCDS DB by Protein ID:ENSP00000352219
Original member Current member EBI ENST00000392109.5 ENSP00000375957.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392109.5Link to Ensembl Protein Viewer:ENSP00000375957.1Re-query CCDS DB by Nucleotide ID:ENST00000392109Re-query CCDS DB by Protein ID:ENSP00000375957
Original member Current member EBI ENST00000392110.6 ENSP00000375958.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392110.6Link to Ensembl Protein Viewer:ENSP00000375958.2Re-query CCDS DB by Nucleotide ID:ENST00000392110Re-query CCDS DB by Protein ID:ENSP00000375958
Original member Current member EBI ENST00000392111.7 ENSP00000375959.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392111.7Link to Ensembl Protein Viewer:ENSP00000375959.2Re-query CCDS DB by Nucleotide ID:ENST00000392111Re-query CCDS DB by Protein ID:ENSP00000375959
Original member Current member EBI ENST00000439945.5 ENSP00000404999.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000439945.5Link to Ensembl Protein Viewer:ENSP00000404999.1Re-query CCDS DB by Nucleotide ID:ENST00000439945Re-query CCDS DB by Protein ID:ENSP00000404999
Original member Current member EBI ENST00000412366.5 ENSP00000406494.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000412366.5Link to Ensembl Protein Viewer:ENSP00000406494.1Re-query CCDS DB by Nucleotide ID:ENST00000412366Re-query CCDS DB by Protein ID:ENSP00000406494
Original member Current member EBI ENST00000431802.5 ENSP00000413908.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000431802.5Link to Ensembl Protein Viewer:ENSP00000413908.1Re-query CCDS DB by Nucleotide ID:ENST00000431802Re-query CCDS DB by Protein ID:ENSP00000413908
Original member Current member NCBI NM_001079866.2 NP_001073335.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001079866.2Link to Protein Sequence:NP_001073335.1Re-query CCDS DB by Nucleotide ID:NM_001079866Re-query CCDS DB by Protein ID:NP_001073335Link to BLAST:NP_001073335.1
Original member Current member NCBI NM_001257342.2 NP_001244271.1 Accepted alive Link to Nucleotide Sequence:NM_001257342.2Link to Protein Sequence:NP_001244271.1Re-query CCDS DB by Nucleotide ID:NM_001257342Re-query CCDS DB by Protein ID:NP_001244271Link to BLAST:NP_001244271.1
Original member Current member NCBI NM_001257343.2 NP_001244272.1 Accepted alive Link to Nucleotide Sequence:NM_001257343.2Link to Protein Sequence:NP_001244272.1Re-query CCDS DB by Nucleotide ID:NM_001257343Re-query CCDS DB by Protein ID:NP_001244272Link to BLAST:NP_001244272.1
Original member Current member NCBI NM_001257344.2 NP_001244273.1 Accepted alive Link to Nucleotide Sequence:NM_001257344.2Link to Protein Sequence:NP_001244273.1Re-query CCDS DB by Nucleotide ID:NM_001257344Re-query CCDS DB by Protein ID:NP_001244273Link to BLAST:NP_001244273.1
Original member Current member NCBI NM_001320717.2 NP_001307646.1 Accepted alive Link to Nucleotide Sequence:NM_001320717.2Link to Protein Sequence:NP_001307646.1Re-query CCDS DB by Nucleotide ID:NM_001320717Re-query CCDS DB by Protein ID:NP_001307646Link to BLAST:NP_001307646.1
Original member Current member NCBI NM_001371443.1 NP_001358372.1 Accepted alive Link to Nucleotide Sequence:NM_001371443.1Link to Protein Sequence:NP_001358372.1Re-query CCDS DB by Nucleotide ID:NM_001371443Re-query CCDS DB by Protein ID:NP_001358372Link to BLAST:NP_001358372.1
Original member Current member NCBI NM_001371444.1 NP_001358373.1 Accepted alive Link to Nucleotide Sequence:NM_001371444.1Link to Protein Sequence:NP_001358373.1Re-query CCDS DB by Nucleotide ID:NM_001371444Re-query CCDS DB by Protein ID:NP_001358373Link to BLAST:NP_001358373.1
Original member Current member NCBI NM_001371446.1 NP_001358375.1 Accepted alive Link to Nucleotide Sequence:NM_001371446.1Link to Protein Sequence:NP_001358375.1Re-query CCDS DB by Nucleotide ID:NM_001371446Re-query CCDS DB by Protein ID:NP_001358375Link to BLAST:NP_001358375.1
Original member Current member NCBI NM_001371447.1 NP_001358376.1 Accepted alive Link to Nucleotide Sequence:NM_001371447.1Link to Protein Sequence:NP_001358376.1Re-query CCDS DB by Nucleotide ID:NM_001371447Re-query CCDS DB by Protein ID:NP_001358376Link to BLAST:NP_001358376.1
Original member Current member NCBI NM_001371448.1 NP_001358377.1 Accepted alive Link to Nucleotide Sequence:NM_001371448.1Link to Protein Sequence:NP_001358377.1Re-query CCDS DB by Nucleotide ID:NM_001371448Re-query CCDS DB by Protein ID:NP_001358377Link to BLAST:NP_001358377.1
Original member Current member NCBI NM_001371449.1 NP_001358378.1 Accepted alive Link to Nucleotide Sequence:NM_001371449.1Link to Protein Sequence:NP_001358378.1Re-query CCDS DB by Nucleotide ID:NM_001371449Re-query CCDS DB by Protein ID:NP_001358378Link to BLAST:NP_001358378.1
Original member Current member NCBI NM_001371450.1 NP_001358379.1 Accepted alive Link to Nucleotide Sequence:NM_001371450.1Link to Protein Sequence:NP_001358379.1Re-query CCDS DB by Nucleotide ID:NM_001371450Re-query CCDS DB by Protein ID:NP_001358379Link to BLAST:NP_001358379.1
Original member Current member NCBI NM_001374085.1 NP_001361014.1 Accepted alive Link to Nucleotide Sequence:NM_001374085.1Link to Protein Sequence:NP_001361014.1Re-query CCDS DB by Nucleotide ID:NM_001374085Re-query CCDS DB by Protein ID:NP_001361014Link to BLAST:NP_001361014.1
Original member Current member NCBI NM_004328.5 NP_004319.1 Accepted alive Link to Nucleotide Sequence:NM_004328.5Link to Protein Sequence:NP_004319.1Re-query CCDS DB by Nucleotide ID:NM_004328Re-query CCDS DB by Protein ID:NP_004319Link to BLAST:NP_004319.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073335.1 419 Q9Y276 419 100% 0 0
NP_001244271.1 419 Q9Y276 419 100% 0 0
NP_001244272.1 419 Q9Y276 419 100% 0 0
NP_001244273.1 419 Q9Y276 419 100% 0 0
NP_001307646.1 419 Q9Y276 419 100% 0 0
NP_001358372.1 419 Q9Y276 419 100% 0 0
NP_001358373.1 419 Q9Y276 419 100% 0 0
NP_001358375.1 419 Q9Y276 419 100% 0 0
NP_001358376.1 419 Q9Y276 419 100% 0 0
NP_001358377.1 419 Q9Y276 419 100% 0 0
NP_001358378.1 419 Q9Y276 419 100% 0 0
NP_001358379.1 419 Q9Y276 419 100% 0 0
NP_001361014.1 419 Q9Y276 419 100% 0 0
NP_004319.1 419 Q9Y276 419 100% 0 0

Chromosomal Locations for CCDS 2419.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 218660988 218661307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218661406 218661545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218661759 218661953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218662197 218662260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218662510 218662679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218662883 218663000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218663134 218663386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1260 nt):
ATGCCACTTTCAGACTTTATTCTGGCTCTGAAGGACAATCCCTACTTTGGGGCTGGATTTGGGCTGGTGG
GTGTGGGCACAGCCCTGGCCCTGGCCCGGAAGGGTGTCCAACTGGGCCTGGTGGCATTCCGGCGCCATTA
CATGATCACACTGGAAGTCCCTGCTCGAGACAGGAGCTATGCCTGGTTGCTTAGCTGGCTCACCCGCCAC
AGTACCCGTACTCAGCACCTCAGTGTCGAGACTTCGTACCTTCAGCATGAGAGTGGCCGCATTTCCACTA
AGTTTGAATTTGTCCCCAGCCCTGGAAACCATTTTATCTGGTATCGGGGGAAATGGATTCGGGTAGAACG
AAGTCGAGAGATGCAGATGATAGACTTGCAGACGGGGACTCCTTGGGAATCTGTCACCTTCACGGCCCTG
GGCACTGACCGAAAGGTTTTCTTCAACATCCTGGAGGAAGCTCGAGAGCTAGCCTTGCAGCAGGAGGAAG
GGAAGACCGTGATGTACACAGCTGTGGGCTCTGAATGGCGTCCCTTTGGCTATCCACGCCGCCGGCGACC
ACTGAATTCTGTGGTTCTACAACAGGGTCTGGCTGACCGAATTGTCAGAGACGTCCAGGAATTCATCGAT
AACCCCAAGTGGTACACTGACAGAGGCATTCCTTACAGACGTGGCTACCTGCTTTATGGGCCCCCTGGTT
GCGGAAAGAGCAGTTTTATCACAGCCCTGGCTGGGGAACTGGAGCACAGCATCTGCCTGCTGAGCCTCAC
GGACTCCAGCCTCTCTGATGACCGACTCAACCACCTGCTGAGCGTGGCCCCGCAGCAGAGCCTGGTACTC
CTGGAGGATGTGGATGCTGCTTTTCTCAGTCGAGACTTGGCTGTGGAGAACCCAGTAAAGTACCAAGGCC
TAGGTCGCCTCACCTTCAGTGGACTGCTCAATGCCTTGGATGGTGTGGCTTCCACCGAGGCCCGCATCGT
GTTCATGACCACCAACCACGTTGACAGGCTGGACCCTGCCCTGATACGCCCGGGGCGAGTGGACCTGAAG
GAGTACGTGGGCTACTGCTCACACTGGCAGCTGACCCAGATGTTCCAGAGGTTCTATCCAGGGCAGGCAC
CTTCCTTAGCTGAGAACTTTGCAGAACATGTCCTTCGAGCTACAAACCAGATCAGTCCTGCCCAGGTGCA
GGGCTACTTCATGCTGTATAAAAATGACCCTGTAGGGGCAATTCACAATGCTGAGTCTCTGAGGAGGTGA

Translation (419 aa):
MPLSDFILALKDNPYFGAGFGLVGVGTALALARKGVQLGLVAFRRHYMITLEVPARDRSYAWLLSWLTRH
STRTQHLSVETSYLQHESGRISTKFEFVPSPGNHFIWYRGKWIRVERSREMQMIDLQTGTPWESVTFTAL
GTDRKVFFNILEEARELALQQEEGKTVMYTAVGSEWRPFGYPRRRRPLNSVVLQQGLADRIVRDVQEFID
NPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVL
LEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLK
EYVGYCSHWQLTQMFQRFYPGQAPSLAENFAEHVLRATNQISPAQVQGYFMLYKNDPVGAIHNAESLRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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