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Report for CCDS39933.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39933.1 Public Mus musculus 7 Klk13 23 108 98 CCDS HistoryNCBI Gene:626834Re-query CCDS DB by CCDS ID:39933.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39933.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000066834.7 ENSMUSP00000065308.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000066834.7Link to Ensembl Protein Viewer:ENSMUSP00000065308.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000066834Re-query CCDS DB by Protein ID:ENSMUSP00000065308
Original member Current member NCBI NM_001039042.2 NP_001034131.2 Accepted alive Link to Nucleotide Sequence:NM_001039042.2Link to Protein Sequence:NP_001034131.2Re-query CCDS DB by Nucleotide ID:NM_001039042Re-query CCDS DB by Protein ID:NP_001034131Link to BLAST:NP_001034131.2

Chromosomal Locations for CCDS 39933.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 43713831 43713882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43720967 43721156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43721268 43721536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43723755 43723891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43726551 43726733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (831 nt):
ATGTGGCCCCTAGTGGCTACCATCGCTTGCCTGACCTTGGCCTTGTCCGAAGGAATCTCCCGGGACTACC
CCAAGATTCTCAATGGTACCAATGGGACTAGTGGTTTTCTCCCAGGTGGCTACACCTGCCTTCCCCACTC
TCAGCCTTGGCAGGCAGCTCTACTGATCCGCGGACGACTTCTCTGTGGAGGGGTTCTGGTTCACCCCAAA
TGGGTACTCACAGCGGCTCACTGCAGGAAAGATGGGTACACAGTTCATCTGGGCAAGCATGCCCTGGGGC
GTGTGGAGAACGGTGAGCAGGCAATGGAGGTGGTCCGCTCTATCCCCCATCCTGAATACCAGGTCACCCC
CACCCACCTGAACCACGACCATGACATCATGCTTCTGGAGCTGAAGTCTCCAGTCCAGCTCAGCAGCCAC
GTCCGTACCCTGAAACTCTCTGCAGATGACTGCCTGCCCACTGGCACCTGCTGCCGTGTTTCTGGCTGGG
GCACCACCACCAGCCCCCAGGTGAATTATCCCAAAACCCTGCAGTGCGCCAACATTGAACTGCGCTCAGA
TGAGGAGTGCCGGCAGGTGTACCCTGGGAAGATCACTGCCAACATGCTCTGTGCTGGTACCAAAGAAGGG
GGAAAGGACTCCTGTGAGGGTGATTCTGGGGGCCCACTGATTTGCAATGGCAAACTCTACGGCATCATCT
CATGGGGAGATTTTCCATGTGGACAGCCCAACCGACCTGGCGTTTACACACGAGTCTCAAAATACCTGCG
TTGGATCCGGGAGATCATCAGAAACACTCCAGAGCAGAGATGGACAAAGGGCACACAATAA

Translation (276 aa):
MWPLVATIACLTLALSEGISRDYPKILNGTNGTSGFLPGGYTCLPHSQPWQAALLIRGRLLCGGVLVHPK
WVLTAAHCRKDGYTVHLGKHALGRVENGEQAMEVVRSIPHPEYQVTPTHLNHDHDIMLLELKSPVQLSSH
VRTLKLSADDCLPTGTCCRVSGWGTTTSPQVNYPKTLQCANIELRSDEECRQVYPGKITANMLCAGTKEG
GKDSCEGDSGGPLICNGKLYGIISWGDFPCGQPNRPGVYTRVSKYLRWIREIIRNTPEQRWTKGTQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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