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Report for CCDS84612.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84612.1 Public Mus musculus 3 Naaladl2 23 108 98 CCDS HistoryNCBI Gene:635702Re-query CCDS DB by CCDS ID:84612.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 84612.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000203414.1 ENSMUSP00000144706.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000203414.1Link to Ensembl Protein Viewer:ENSMUSP00000144706.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000203414Re-query CCDS DB by Protein ID:ENSMUSP00000144706
Original member Current member NCBI NM_001326288.1 NP_001313217.1 Accepted alive Link to Nucleotide Sequence:NM_001326288.1Link to Protein Sequence:NP_001313217.1Re-query CCDS DB by Nucleotide ID:NM_001326288Re-query CCDS DB by Protein ID:NP_001313217Link to BLAST:NP_001313217.1

Chromosomal Locations for CCDS 84612.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 23804916 23805114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 23846476 23846674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 23869637 23869730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 24002900 24002995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 24058117 24058263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 24171611 24171730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 24175392 24175597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 24178440 24178532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 24208314 24208457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 24335194 24335344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 24413350 24413469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 24432937 24433210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 24551549 24552050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 24783452 24783494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2388 nt):
ATGGGAGAGAATGAAGCTGGCTTACCTAACATGTCTTTGCAAGGTAAAAAGATGGCTTATCAGAAGGTGA
AGGCAGATCTAAGAACCTCAGGACATTCACAGTACTTAGACAATGATGAACTTCAAGCCACTGCCCTTGA
TTTAGAGTGGGATATGGAGAAGGAACTGGAAGAGCCGGGCTTTGATCAGTTTCAACCAGATAGTGCTGAG
CATCAGAACTTGGGGCACTCTGAGACTTTGGACCTCCATCTTGATTCCATTCAACCAGCAACGTCACCCA
AAGGAAGATTTCAGAGGCTTCAAGAAGAGTCTGACTGTGTGACCCACTACACAAGATCTGCACCAAAGAA
CAACCACTGCAGTTTTTGCTACATGTTAAAAATACTGTGCATAGCTACTACTCTATTTATTTTTGGAATT
ATAATAGGTTATTATGCACACATGAATTGTCCTTCTGATGCCTCACCATCAGGAACAAATAACCCTCAGT
TATACCAAGATATTCTGAAGACAATCAAAGCAGAAGATATAAAGAAATCCTTCAGAAATTGGCTACAACT
CTATGACAGCAAGGATGACATGGAAATTGCAAAGAAGATTAAGAGTCACTGGATTGCATTGGGCTTGGAA
GATACACAGTTTATAAACTATTCCGTGCTGCTGGATTTTCCAGGGTCCTCTCCAGGCACCATCACTCTGA
GCAGCACTGGCCAGTGCTTTTATCCTGATGGCCAACCTTGCAGGGAAGAAGCCAGAGGAGGCCACAGCCA
AGATCTGTTCTTCTCATATGCAGCCTATTCTGCCAAAGGAACTCTCCAGGGTGATGTCATCGATGTGAGT
TATGGAACTATGGATGATTTAAAACGGATTACAAAGTTGAAAAATACTACAAATCAAATTGCACTCCTGA
AATTAGGAAAATTACCACTACTGTATAAGATTTCCTTATTGGAAAAGGCTGGGTTTGGAGGTGCGCTTCT
CTACATTGATCCCTGTGATGCAGCAGAGTCTTCAGTCCTTAGCTCTGAGCCTTTTGTGGTGACTCTGAAT
CCAGGAGGAGACCCCTCTACACCTGGATACCCCAGTCATGATGGAAGCTTTAGAAAAAGCCGAACAAACC
TCACCTCCCTGCTAGTGCAGCCTATCTCTCCATCCCTCGTTAAAATGCTCATCTCTTTGCCAAAACTGAA
AATGGATAAAGATGCCTGCAGTCCTCTAGAGCTTCCACATAATGAAAAGAGAACTGTCAGTTTGCAGGTA
CAGACAGTCACACAGTTTAAAACAGTGTCTAATGTTGTTGGATATCTAAGAGGCTTGACATCACCAGACC
GGTATATTATAGTTGGCAGCAACCACCATGCTGGATACAGTTATAAAGGTCAAGAATGGGCCAGCAGTAC
TGCAGTAATCACAGCATTTATTGAAGCTATGATGTTAAGAGTGAAGAAAGGATGGAGACCAGAACGCACT
ATTGTTTTCTGCTCATGGGGAGGAACACCCTGGGGCAAAATTGGCTCCTATGAATGGGGAGAGGATTTTG
TGAAGATTCTACAAAAAAATGCTGTGGCTTACATTGGCCTTCATAGCCCCATCCGGGGCAACTCCAGTCT
ATATCCAGTAGTGTCTCCATCGCTCCAGCAACTGGTTATAGAGAAAATTAAGTTCACGTGCATGCAGAGA
GCTCAGTGCCTGGGAGCCAATGTCAGCTCTGTGCAGATACAAGGTGATGCTGATTATTTCATCAACCATC
TTGGAGTTCCAACTGTGCAGTTTGCTTATGAGGACATCAAAACATTAGAGGGTCCAAGTTTTCTCTCTGA
GGCCATTTTTCCTACACATGCAACAAAAATTGAAGAAGTGGATCCGTCTTTCAGCCTCCATGAAGCCATT
ACTAAGCTCTCAGGAGAAGTAATTTTACAAATTGCCAATGAACCAATACTGCCCTTCAATGCCCTCGATA
TAGCATTAGGAGTTCAAAACAGCCTTAAAGGTAATGAGCCTAGTGTTCCTCACCTGCTTGCCTTAGCATC
AAGACTGAGGGAAAGTGCAGAGCTCTTCCAGTCAGATGAGATGCGACCTGCTAATGACCCAAAGGAGAGA
GCTCCCAGCCGTGTCCGAATGCTGAATGACATCCTTCAAGACCTGGAGAAGAACTTCCTGGTGCAGTGGG
TACCACCAGGTTTTTATAGAAATATCCTGTACCATCTTGATGAGAAGACAAACCAGTTTTCCATTCTTAA
GGAGGCTTGGGAGCACTGCAATCCACAGACATCAAATGAGACTTTTCAAGAGGCCCTGTCCAATGTGCTG
AATAGCATTAATTCAGCTCATATTTCCTTCAAAGTAGGACTGGATGTGTTTGAGAGTGTCTTACTTGGAA
AGAACTGA

Translation (795 aa):
MGENEAGLPNMSLQGKKMAYQKVKADLRTSGHSQYLDNDELQATALDLEWDMEKELEEPGFDQFQPDSAE
HQNLGHSETLDLHLDSIQPATSPKGRFQRLQEESDCVTHYTRSAPKNNHCSFCYMLKILCIATTLFIFGI
IIGYYAHMNCPSDASPSGTNNPQLYQDILKTIKAEDIKKSFRNWLQLYDSKDDMEIAKKIKSHWIALGLE
DTQFINYSVLLDFPGSSPGTITLSSTGQCFYPDGQPCREEARGGHSQDLFFSYAAYSAKGTLQGDVIDVS
YGTMDDLKRITKLKNTTNQIALLKLGKLPLLYKISLLEKAGFGGALLYIDPCDAAESSVLSSEPFVVTLN
PGGDPSTPGYPSHDGSFRKSRTNLTSLLVQPISPSLVKMLISLPKLKMDKDACSPLELPHNEKRTVSLQV
QTVTQFKTVSNVVGYLRGLTSPDRYIIVGSNHHAGYSYKGQEWASSTAVITAFIEAMMLRVKKGWRPERT
IVFCSWGGTPWGKIGSYEWGEDFVKILQKNAVAYIGLHSPIRGNSSLYPVVSPSLQQLVIEKIKFTCMQR
AQCLGANVSSVQIQGDADYFINHLGVPTVQFAYEDIKTLEGPSFLSEAIFPTHATKIEEVDPSFSLHEAI
TKLSGEVILQIANEPILPFNALDIALGVQNSLKGNEPSVPHLLALASRLRESAELFQSDEMRPANDPKER
APSRVRMLNDILQDLEKNFLVQWVPPGFYRNILYHLDEKTNQFSILKEAWEHCNPQTSNETFQEALSNVL
NSINSAHISFKVGLDVFESVLLGKN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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