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Report for CCDS21689.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21689.1 Public Mus musculus 7 Rbmxl2 23 108 98 CCDS HistoryNCBI Gene:76572Re-query CCDS DB by CCDS ID:21689.1Re-query CCDS DB by GeneID:76572See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21689.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098135.1 ENSMUSP00000095739.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098135.1Link to Ensembl Protein Viewer:ENSMUSP00000095739.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000098135Re-query CCDS DB by Protein ID:ENSMUSP00000095739
Original member Current member NCBI NM_029660.2 NP_083936.1 Accepted alive Link to Nucleotide Sequence:NM_029660.2Link to Protein Sequence:NP_083936.1Re-query CCDS DB by Nucleotide ID:NM_029660Re-query CCDS DB by Protein ID:NP_083936Link to BLAST:NP_083936.1

Chromosomal Locations for CCDS 21689.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 107209510 107210667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1158 nt):
ATGGTTGAAGCCGACCGTCCAGGGAAGCTCTTCATCGGCGGTCTCAACCTCGAGACCGACGAGAAGGGCC
TCGAAACCGCTTTCGGCAAGTATGGCCGCATCATCGAGGTGCTCCTGATGAAGGACCGGGAAACCTCCAA
GTCCAGAGGCTTCGCCTTCGTCACCTTCGAGAACCCCGCGGACGCCAAGGCCGCAGCCCGAGACATGAAC
GGCAAGTCCCTGGATGGTAAGGCCATCAAAGTGGCCCAAGCCACCAAGCCGGTGTTCGAGAGCGGCCGGC
GCGGGCCCCCTCCTCCCCGAAGCCGCGGCCGCCCGAGGGGCCTGCGCGGGACCCGTGGCGGCGGCCCGAG
GCGCCCTCCCTCCCGGGGCGGGTCGGCCGACGAAGGCGGCTACACGGGGGATTTCGACCTGCGGCCTTCG
CGGGCCCCCATGCCACTGAAGCGCGGGCCGCCGCCGCGCCGGGCCGGGCCTCCGCCCAAAAGAGCAGCGC
CGTCGGGCCCCGCGCGCAGCGGCGCGGGAATTCGCGGGCGGGCGGCGGGCTCCCGGGGACGAGACGGCTA
CGGGGGCCCGCCGCGCCGGGAGCTGCCACCGCCGCGCCGCGACCCGTACCTGGGCCCGCGCGACGAGGGC
TACTCGCCCCGGGAGAGCTATTCGAGCCGCGACTACCCGAGCGCCCGGGACCCGCGCGACTTCGCGCCCT
CGCCCCGCGACTACACCTACCGCGACTATGGCCACTCGAGCGCGCGAGACGAATGCCCTTCCCGGGGCTA
CTGTGAGCGCGACGGCTACGGCGGCCGCGAGCGCGACTACGAGCATCCTAGCGGAGGCTCCTACCGCGAC
CCCTTCGACAGCTACGGGGACCCGCGTGGCGCCGGTCCTGCCCGAGGGCCACCGCCATCTTACGGCGGGG
GCCGCTATGACGAGTACCGAGGCTGCTCGCCCGACGGCTATGGCGGCCGCGACAGCTACCGCAGCGAGCG
CTACTCGAGTGGCCGTGAGCGCGTGGGTAGGCCGGAGCGCGGGCTGCCGCCGTCTGTAGAACGAAACTGC
CCGGCGCCGCGGGATTCCTACAGCCGCTCGGGCCGCCGGGCGCCCCCGAGGGGCGGAGGCCGCGTGGGAA
GCCGCCTGGAGCGAGGGGGAGGCCGGAGCAGGTACTGA

Translation (385 aa):
MVEADRPGKLFIGGLNLETDEKGLETAFGKYGRIIEVLLMKDRETSKSRGFAFVTFENPADAKAAARDMN
GKSLDGKAIKVAQATKPVFESGRRGPPPPRSRGRPRGLRGTRGGGPRRPPSRGGSADEGGYTGDFDLRPS
RAPMPLKRGPPPRRAGPPPKRAAPSGPARSGAGIRGRAAGSRGRDGYGGPPRRELPPPRRDPYLGPRDEG
YSPRESYSSRDYPSARDPRDFAPSPRDYTYRDYGHSSARDECPSRGYCERDGYGGRERDYEHPSGGSYRD
PFDSYGDPRGAGPARGPPPSYGGGRYDEYRGCSPDGYGGRDSYRSERYSSGRERVGRPERGLPPSVERNC
PAPRDSYSRSGRRAPPRGGGRVGSRLERGGGRSRY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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