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Report for CCDS51977.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51977.1 Public Mus musculus 7 Tmem238 23 108 98 CCDS HistoryNCBI Gene:664968Re-query CCDS DB by CCDS ID:51977.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51977.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000168578.2 ENSMUSP00000130452.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000168578.2Link to Ensembl Protein Viewer:ENSMUSP00000130452.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000168578Re-query CCDS DB by Protein ID:ENSMUSP00000130452
Original member Current member NCBI NM_029384.1 NP_083660.1 Accepted alive Link to Nucleotide Sequence:NM_029384.1Link to Protein Sequence:NP_083660.1Re-query CCDS DB by Nucleotide ID:NM_029384Re-query CCDS DB by Protein ID:NP_083660Link to BLAST:NP_083660.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083660.1 176 A9JSM3 176 100% 0 0

Chromosomal Locations for CCDS 51977.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 4789012 4789542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (531 nt):
ATGGCGGCAGCGTCACCGGTGTGCGGCTCGCAGGCGTCCGCGGTCGGCGCCTCGTCCCCACCCGCGCCCG
CACCGGCTCCAGCGGCCGGCTTGGGCCGCTGCCGCATGGCGCTGCTGCTGGCCGTGGCCTTGGACGTGGC
GGGCATGGCGGCGCTGCTGACCGGCGTGTTCGCGCAGCTGCAGGTGCGCGGCCGCGACTTCGGGGACCTG
CTCATCTACTCTGGGGCGCTGCTGGTGTTCTTGAGCCTGCTGGGCTGGATTCTCTGGTACACCGGCAACA
TCGAGATCTCGCGCCAGGAGCTGGAGCGTGACTACGGCCTACGACCCTCGGCGATTGCCCGCCTGGCGCG
CAAGCTGTCCCGTCGCTGGTCGGCGCCCGCCACCGCCAGTCCCCGGACCACAGCCGGTCTCCGCTCAGCA
CGCAGAGCGAACCGCGCGCCCCAGCCCTCCTCCTCCGGCTCCCGCCGCGTGCGCCTGCAGCTCGCCACGC
TTGAGGCGGGGTCCGTGGCGGCAGGCACGGGCAGCGAGTGA

Translation (176 aa):
MAAASPVCGSQASAVGASSPPAPAPAPAAGLGRCRMALLLAVALDVAGMAALLTGVFAQLQVRGRDFGDL
LIYSGALLVFLSLLGWILWYTGNIEISRQELERDYGLRPSAIARLARKLSRRWSAPATASPRTTAGLRSA
RRANRAPQPSSSGSRRVRLQLATLEAGSVAAGTGSE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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