NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS84477.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84477.1 Under review, update Mus musculus 2 Myo3a 23 108 98 CCDS HistoryNCBI Gene:667663Re-query CCDS DB by CCDS ID:84477.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Provisional (this record has not been manually reviewed by the collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 84477.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000044749.13 ENSMUSP00000046329.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000044749.13Link to Ensembl Protein Viewer:ENSMUSP00000046329.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000044749Re-query CCDS DB by Protein ID:ENSMUSP00000046329
Original member NCBI NM_148413.3 NP_680779.3 Updated not alive Link to Nucleotide Sequence:NM_148413.3Link to Protein Sequence:NP_680779.3Re-query CCDS DB by Nucleotide ID:NM_148413Re-query CCDS DB by Protein ID:NP_680779
Current member NCBI NM_148413.4 NP_680779.4 Pending alive Link to Nucleotide Sequence:NM_148413.4Link to Protein Sequence:NP_680779.4Re-query CCDS DB by Nucleotide ID:NM_148413Re-query CCDS DB by Protein ID:NP_680779Link to BLAST:NP_680779.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_680779.4 1613 Q8K3H5 1613 97.7061% 0 37

Chromosomal Locations for CCDS 84477.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 22227636 22227642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22241051 22241235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22245516 22245650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22266057 22266161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22267104 22267203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22282587 22282663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22291806 22291951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22294473 22294538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22297563 22297718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22323574 22323673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22332371 22332487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22333428 22333532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22333628 22333711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22340114 22340316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22361593 22361691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22362029 22362143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22396222 22396348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22399762 22399972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22407310 22407454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22423217 22423370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22542415 22542503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22544335 22544464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22546337 22546416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22546858 22546935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22558215 22558420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22564991 22565102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22567689 22567851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22574230 22574353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22577341 22578229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22579713 22579857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22600082 22600188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22601110 22601150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22602119 22602262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22618049 22618169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4866 nt):
ATGCAGATGACAGAAACCTTTGAGATGCTTCCATTAATTGGAAAAACAATCATCTTTGATAACTTTCCTG
AT
CCTTCTGATACATGGGAAATCATTGAAACCATCGGCAAAGGAACTTATGGGAAGGTTTTCAAAGTCCT
G
AATAAGAAAAGTGGCCAGAAAGCAGCAGTCAAAATTTTGGATCCAATCCATGATATCGATGAAGAGATT
GAA
GCAGAGTATAACATCTTAAGAACACTTTCTGACCACCCAAATGTGGTCAGATTCTACGGGATTTACT
TT
AAAAAGGACAAGATAAATGGAGATAAGCTATGGCTGGTTCTGGAGCTGTGCAATGGAGGATCAGTGAC
T
GATCTTGTGAAAGGATTTCTGAAGAGGGGAGAAAGAATGAGCGAGCCTGTAATTGCATATATTTTACAC
GAA
GCACTAATGGGACTTCAGCATCTTCATAGCAACAAAACCATCCACCGTGATGTCAAAGGAAATAACA
TC
CTGTTGACTACTGAAGGTGGAGTAAAACTAGTAGATTTTGGTGTGTCTGCACAGCTCAGCAGCACCCG
G
CACCGCCTGAACACCTCCGTAGGAACACCATTTTGGATGGCTCCTGAGGTGATTGCTTGTGAACAGCAA
CTA
GATACCACTTACGATGCTAGATGTGACACATGGTCCCTGGGTATCACGGCTATTGAGCTTGGTGATG
GA
GATCCTCCACTAGCTGAGCTGCATCCCATGAGAGCACTCTTCAAAATACCAAGGAATCCACCCCCTAA
A
CTCCGGCAGCCTGAGCTGTGGTCCGCAGAGTTCAATGACTTCATTAGCAAATGCTTGACCAAAGATTAT
GAA
AAGCGTCCAACAGTGTCAGATCTTTTGAAGCATAAATTTATTACTCAGATCGAGGGCAAAGATGTGA
TA
CTACAAAAACAACTAATGGAATTCATTGATATCCATCAATGCCTGGGAAGCACAGAGAAGGCCAGGCA
T
GAACGAATTCATACCAAGAAAGGTAATTTAAATAGATCTCTCATTTCCAGTCTGAAGGATGTAGACGAT
TTG
GCAACCCTAGATGTTCTGGATGAGAACACAGTGTCTGAACATCTTGAGAAATGTTATTCCAGAGATC
AG
ATCTATATTTATGTGGGAGATATTCTCATTGCACTGAACCCTTTTCAGAGTCTGGGTATTTATTCCAC
A
AAGCTTTCTAGGTTGTATATTGGAGCAAAGAGAACTGCCAACCCACCTCACATTTTTGCAATGGCTGAT
TTG
GGATACCAGTCTATGGTCACATATAATGCAGACCAGTGCATCGTTATTTCTGGAGAAAGTGGTGCTG
GC
AAGACAGAGAGCGCTCATCTTCTGGTTCAACAGCTCACTGTGCTTGGAAAGGCTAATAACAGAACCCT
G
CAAGAGAAGATTTTACAAATGAACAATTTGGTTGAAGCCTTTGGCAATGCCTGCACTATTATAAATGAC
AAC
TCCAGCAGATTTGGAAAATACTTAGAAATGAAATTTACTTCTTCTGGAGCTGTAGTTGGGGCACAGA
TT
TCTGAATACCTTCTGGAAAAATCCCGTGTCATTCACCAAGCCATTGGAGAAAAAAATTTTCATATTTT
T
TACTACATTTATGCTGGGTTAGCAGAAAAGAAGAAACTAGCTCTTTACAAATTGCCTGAAAACAAGCCA
CCC
AGGTACTTACAAAATGACAACCTCAGAACAGTACAGGACATGATGAACAATAGTTTCTATAAATCCC
AG
TATGAATTAATTGAACAATGTTTCAAAGTCATAGGTTTTACAATGGAGCAACTTGGAAGTGTATATAG
T
GTACTCGCCGCCATCTTGAACGTTGGAAACATTGAATTCTCCTCGGTGGCAACTGAATACCAGATGGAC
AAG
AGCTACATTTGCAATCACACTGCTCTGGAAAACTCCGCTTCTTTGCTTTGCATTCAAGCAGATGAGC
TG
CAGGAAGCTCTCACCTCACACTGTGTGGTCACTAGAGGAGAAACAATTATTCGACCCAACACAGTGGA
A
AAGGCTGCTGATGTCCGAGATGCCATGGCCAAAACTTTATATGGCCGTCTCTTTAGCTGGATAGTCAAT
TGT
ATTAACAGCTTGCTGAAGCATGACACATCACCTAGTGGGGATGAGGAGCTAAACATCGGCATTCTTG
AC
ATATTCGGCTTTGAAAACTTCAAAAGAAATTCCTTTGAGCAGCTGTGCATTAACATTGCAAATGAACA
G
ATCCAGTATTATTTTAATCAGCACGTGTTTGCATGGGAGCAGAATGAATACCTAAATGAAGATGTAGAT
GCT
AGAGTTATTGAATACGAAGACAACCGGCCCCTCTTGGACATGTTTCTACAGAAGCCCATGGGCTTAT
TG
TCTCTGCTTGATGAGGAAAGCAGATTTCCCAAGGCCACTGACCAGACTCTCATAGAAAAATTTGAAGA
C
AACCTGAAGTCACAGTACTTCTGGAGACCCAAAAGAATGGAACTCAGTTTTGGCATTCACCACTATGCA
GGA
AAAGTCCTCTATAGTGCTAGTGGGTTCTTGGCTAAAAACAGAGACACTTTCCCAACTGATATTGTGC
TG
CTTTTGAGGTCATCAGAAAACAGTGTAATTCGGCAACTTGTCAACCACCCTCTGACCAAAACAGGTAA
T
CTGCCACTTTCTAAAACTAAAAACATAGTAAACTATCAGATGTGGAATTCAGAGAAATCCACAAACCTG
ACC
AAGGGTGAAACTAGAGATGTCACATGCCATGCCTGTGAAACCACCAATGTGAAAACACAAACGGTCT
CA
TCCTATTTTAGATACTCCTTGATGGATTTATTATCTAAAATGGTAGTGGGCCAACCTCATTTTGTCCG
T
TGCATCAAACCAAATAATGAGCGACAGGCAAGAAAGTATGACAAGGAGAAAGTTCTGCTCCAGCTGCGT
TGC
ACAGGGATTTTGGAAACAGCAAGAATTCGAAGGCTTGGTTATTCACATCGGATACTCTTCGCTAACT
TT
ATAAAGAGGTATTACATTCTCTGCTACAAATCGAGTGAAGAGCCCCCAGTGAGCCCAGACACCTGTGC
T
GCCATTTTGGAAAAGGCTGGTCTTGATAACTGGGCTCTTGGAAAAACGAAAGTGTTCCTTAAATATTAT
CAT
GTGGAACAGTTGAATCTAATGCGAAAGGAAGCTACCAACAAGCTTGTTTTGATTCAAGCCAGTGTCA
GA
GCATTCTTGGGTGCAAGAAGATACCAAGAACTTCAGCAGAAGAGGAAGAGTAGTGCTGTAATAATACA
G
TCAGCTGCAAGAAGACATCTCTTGCGAAAACATGGAAAAGAAACATCTAATGTGAAAAGTGCAGCAGGA
AGG
AGCATTCGGGCTAAGGATCAGGAATTTGACTACAAGAAAAATTTTGAAACCAAAAGGGAATCTTTTG
TG
AAGAAACAGACAGAAAACGCAGTGCCTACTAATGAATCCAACACTTCAACTCCAAACAACAAAGAGAG
C
CCATCTGCTGGGAAGACAGCTCCCTTCAGAGCAGAGTCAAAGGCCACCAATGTTGAGAGTAACAACAGA
AGA
TACCATACTCAGAAGAAAATGAGCAATGTGTATGCAGAAGGACAGAATCAAGAGCTATATATTGTGG
AG
GACACTTGGGCAGAAGTAAGCCCCAGGCAGAAGTATGTGCAAGACCTGGAAGAAAGCAGAAAGATGAG
G
AAAGAGGAGAAAGGAGATGCTGTGATCCAGAGTTACTGTCAGTGGTACACAGAGGGAAGCAACTTTGAA
GAA
TCAAAAGCAACATGTCTAGAAGGAAGGGAGACATGGGAAAGGACAAGCTGCCCAGGGCTGTGGCTGA
CT
GAGGAGATTTACCTGAGAAAAACTTTGGATCCTACTCTTAGCCAAAAGTCAGTCTATCAAAATGCAGA
T
GGCAAAGAAAAAGAACATAAAGTATCTGTGGTTACCCAGAATGCACCGCTGGGCAACCTGGAGAGAGAC
TAT
CACTTGCTAGGGTTCCTTGGAGAAGAAGACACTGGACCAGTGCCTCAGGCCCAGGAAGAACACAAGG
CT
GTGTCCATTCATAGCAAATACCAGAGTTCCAAGAAAAAGCAACAGCTGGGAAAGGACAGGCTGGCACC
T
CCCTTTAAGAATCAAAAGATCCTTTCATCGTCCACAGAAGTAGCAAAAACCACTCACAATGTCTATCCC
TGT
CCGACAAAGCAGGAGGGAGTCCATCATAGCAAGATGGTGGATGAGAGAGACTCAAAAATGGCTTCAA
AA
AAAGAAGCGTGGGATTTAGCAATGTTTTCAAGACAGATATCAAAGTTATCTGAAGAGTATTTCATTCT
G
CAGAAAAACTTGAATGAAATTATTTTGGCCCAGCAACTGAAGCCATTTTATCTAGGTATCTATCGCCAT
AAA
CCAATCAACAGACATGTTTCTACTCACCAATACCTCTCAGGTGTCTCTAAAGGGGAAGAACCAAAAA
TA
CTGAGACCTCCAAGACGACCTCGGAAACCCAAAACATTAAATAACCCTGAAGACTCCACATACTACTA
T
CTACTCCATAAGTCAACCCAAGAAGAAAAACGGAGACCAGGAAAAGACAGTCAAGGGAAGTTATTAGGT
TTG
GAAGATTTCTATTATAAGGAATTTTTGCCTACTCATTACGGACCCAAGGCACATAGCTCTAATGCAA
GA
GAATGGAAAGCACTGAAGGAACCCCAGGCTCAACCCATTGAGAGTAATGAGAGGTGTTGGACCACCTC
A
GAGAATGAGAGCCTGGAGGAAGAGAGGATTTCAGCCAACCCTTATGACTACAGGAGGCTCCTGCGCAAA
ACC
TCCCAGCGGCAGCGCCTGGTGCAGCAGTTGTAG


Translation (1621 aa):
MQMTETFEMLPLIGKTIIFDNFPDPSDTWEIIETIGKGTYGKVFKVLNKKSGQKAAVKILDPIHDIDEEI
E
AEYNILRTLSDHPNVVRFYGIYFKKDKINGDKLWLVLE
LCNGGSVTDLVKGFLKRGERMSEPVIAYILH
E
ALM
GLQHLHSNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLSSTRHRLNTSVGTPFWMAPEVIACEQQ
L
DTTYDARCDTWSLGITAIELGDGDPPLAELHPMRALFKIP
RNPPPKLRQPELWSAEFNDFISKCLTKDY
E
KRPTVSDLLKHKFITQIEGKDVILQKQLMEFIDIHQCLGSTEKA
RHERIHTKKGNLNRSLISSLKDVDD
L
ATLDVLDE
NTVSEHLEKCYSRDQIYIYVGDILIALNPFQSLGIYSTKLSRLYIGAKRTANPPHIFAMAD
L
GYQSMVTYNADQ
CIVISGESGAGKTESAHLLVQQLTVLGKANNRTLQEKILQMNNLVEAFGNACTIIND
N
SSRFGKYLEMKFTSSGAVVGAQISEYLLEKSRVIHQA
IGEKNFHIFYYIYAGLAEKKKLALYKLPENKP
P
RYLQNDNLRTVQDMMNNSFYKSQYELIEQCFKVIGFTMEQLGSVYSVLAAILNVGNIEFSSVATEYQMD
K
SYICNHTALEN
SASLLCIQADELQEALTSHCVVTRGETIIRPNTVEKAADVRDAMAKTLYGRLFSWIVN
C
INSLLKHDTSP
SGDEELNIGILDIFGFENFKRNSFEQLCINIANEQIQYYFNQHVFAWEQNEYLNEDVD
A
RVIEYEDNRPLLDMFLQKPMGLLSLLDEESRFPKATDQTLI
EKFEDNLKSQYFWRPKRMELSFGIHHYA
G
K
VLYSASGFLAKNRDTFPTDIVLLLRSSENSVIRQLVNHPLTKTGNLPLSKTKNIVNYQMWNSEKSTNL
T
K
GETRDVTCHACETTNVKTQTVSSYFRYSLMDLLSKMVVGQPHFVRCIKPNNERQARKYDKEKVLLQLR
C
TGILETARIRRLGYSHRILFANFIK
RYYILCYKSSEEPPVSPDTCAAILEKAGLDNWALGKTKVFLKYY
H
VEQLNLMRKEATNKLVLIQASVRAFLGARRYQELQQKRKSSAVIIQS
AARRHLLRKHGKETSNVKSAAG
R
SIRAKDQEFDYKKNFETK
RESFVKKQTENAVPTNESNTSTPNNKESPSAGKTAPFRAESKATNVESNNR
R
YHTQKKMSNVYAEGQNQELYIVEDTWAEVSPRQKYVQDLEESRKMRKEEKGDAVIQSYCQWYTEGSNFE
E
SKATCLEGRETWERTSCPGLWLTEEIYLRKTLDPTLSQKSVYQNADGKEKEHKVSVVTQNAPLGNLERD
Y
HLLGFLGEEDTGPVPQAQEEHKAVSIHSKYQSSKKKQQLGKDRLAPPFKNQKILSSSTEVAKTTHNVYP
C
PTKQEGVHHSKMVDERDSKMASKKEAWDLAMFSRQ
ISKLSEEYFILQKNLNEIILAQQLKPFYLGIYRH
K
PINRHVSTHQYLS
GVSKGEEPKILRPPRRPRKPKTLNNPEDSTYYYLLHKSTQEEKRRPGKDSQGKLLG
L
EDFYYKEFLPTHYGPKAHSSNAREWKALKEPQAQPIESNE
RCWTTSENESLEEERISANPYDYRRLLRK
T
SQRQRLVQQL




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser