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Report for CCDS21672.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21672.1 Public Mus musculus 7 Or2ag2b 23 108 98 CCDS HistoryNCBI Gene:66786Re-query CCDS DB by CCDS ID:21672.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21672.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000075414.7 ENSMUSP00000074868.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000075414.7Link to Ensembl Protein Viewer:ENSMUSP00000074868.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000075414Re-query CCDS DB by Protein ID:ENSMUSP00000074868
Original member Current member EBI ENSMUST00000166880.2 ENSMUSP00000130958.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000166880.2Link to Ensembl Protein Viewer:ENSMUSP00000130958.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000166880Re-query CCDS DB by Protein ID:ENSMUSP00000130958
Original member Current member EBI ENSMUST00000217739.1 ENSMUSP00000151783.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000217739.1Link to Ensembl Protein Viewer:ENSMUSP00000151783.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000217739Re-query CCDS DB by Protein ID:ENSMUSP00000151783
Original member Current member NCBI NM_001360747.1 NP_001347676.1 Accepted alive Link to Nucleotide Sequence:NM_001360747.1Link to Protein Sequence:NP_001347676.1Re-query CCDS DB by Nucleotide ID:NM_001360747Re-query CCDS DB by Protein ID:NP_001347676Link to BLAST:NP_001347676.1
Original member Current member NCBI NM_028910.4 NP_083186.2 Accepted alive Link to Nucleotide Sequence:NM_028910.4Link to Protein Sequence:NP_083186.2Re-query CCDS DB by Nucleotide ID:NM_028910Re-query CCDS DB by Protein ID:NP_083186Link to BLAST:NP_083186.2

Chromosomal Locations for CCDS 21672.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 106818085 106819035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGAACCCTGGAATTCTACCTTGGAAAGTGGATTCATCTTGGTGGGGATTCTGGATGGCAGTGGCTCTC
CTGAACTGCTCTGTGCCACAGTTACAACCCTGTACATGTTGGCACTGATCAGCAATGGACTTCTACTCCT
GGTCATCACAGTGGATGCCCGGCTTCACGTACCCATGTACCTCCTACTGAGGCAGCTGTCTCTCATTGAC
CTCCTCTTCACATCAGTTGTAACTCCCAACACTGTTGTGGATTTTCTGCTCAGAGACAACACCATATCCT
TTGAGGGATGTGCCCTTCAATTGTTCTCAGCAATGACATTGGGTGGTGCAGAGGACCTCCTTCTGGCCTT
CATGGCCTATGATAGGTATGTGGCCATTTGTCATCCTCTAAACTACATGATCTTCATGAGTCCAAAGGCC
TGCAGGCTCATGGTGGCCATATCATGGATCCTAGCATCTCTTAGTGCCCTAGGTCACACAGTGTACACAA
TGCACTTCCCTTTTTGCATGTCCCAGGAAATCAGACACCTGCTCTGTGAGGTTCCTCCATTGTTGAAATT
GGCTTGTGCAGACACATCTCAATATGAGCTCATGGTTTATGTGACAGGAGTGATATTCCTATTGCTCCCC
CTCTCTGCCATTATTACCTCCTACTCACTAATTCTATTCACTGTGCTGCACATGCCTTCAAATGAGGGCA
GGAAGAAAGCCCTTGTCACCTGTTCCTCCCACTTGACTGTGGTTGGGATGTTCTATGGGGGTGCCACTTT
CATGTATGTGCTGCCCAGTTCCTTCCACAGTCCTAAGCAAGACAATATCATCTCTGTGTTCTATACAATT
GTCACACCAGCTCTGAACCCCCTCATTTACAGCCTGAGAAATAAGGAGGTGATTGGAGCTGTTAGAAGAG
TACTGGGGAGACATATTCTGCCAGCACACGCCACTGTTTAG

Translation (316 aa):
MEPWNSTLESGFILVGILDGSGSPELLCATVTTLYMLALISNGLLLLVITVDARLHVPMYLLLRQLSLID
LLFTSVVTPNTVVDFLLRDNTISFEGCALQLFSAMTLGGAEDLLLAFMAYDRYVAICHPLNYMIFMSPKA
CRLMVAISWILASLSALGHTVYTMHFPFCMSQEIRHLLCEVPPLLKLACADTSQYELMVYVTGVIFLLLP
LSAIITSYSLILFTVLHMPSNEGRKKALVTCSSHLTVVGMFYGGATFMYVLPSSFHSPKQDNIISVFYTI
VTPALNPLIYSLRNKEVIGAVRRVLGRHILPAHATV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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