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Report for CCDS20813.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20813.1 Public Mus musculus 7 Zfp329 23 108 98 CCDS HistoryNCBI Gene:67230Re-query CCDS DB by CCDS ID:20813.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20813.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000072222.7 ENSMUSP00000072079.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000072222.7Link to Ensembl Protein Viewer:ENSMUSP00000072079.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000072222Re-query CCDS DB by Protein ID:ENSMUSP00000072079
Original member Current member EBI ENSMUST00000121215.1 ENSMUSP00000113355.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000121215.1Link to Ensembl Protein Viewer:ENSMUSP00000113355.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000121215Re-query CCDS DB by Protein ID:ENSMUSP00000113355
Original member Current member NCBI NM_026046.3 NP_080322.2 Accepted alive Link to Nucleotide Sequence:NM_026046.3Link to Protein Sequence:NP_080322.2Re-query CCDS DB by Nucleotide ID:NM_026046Re-query CCDS DB by Protein ID:NP_080322Link to BLAST:NP_080322.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080322.2 522 Q6GQR8 522 100% 0 0

Chromosomal Locations for CCDS 20813.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 12810027 12811595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1569 nt):
ATGGAGGGATTTACAAGAGAGGCTCCCTGCTTCCCCATTTTAGGTGATAATTGGGACTGTGAGAACCAGG
AAAGAAATTTGAGGCAATCTCCTTTAATTGATGAGAAAACAGAGGCACAGGAAGCAAATTGTGGCCATGT
TAATTTGGGGGAGCATTTGAGTACAAATCCAGCCCTTCTACCCTCTCAGAGAGTTCCTGGGACAAACGGC
TTCCATGTTTTTAACTCAGATATTAAAACTTTTGATTGTGACCAAACCTTACATAGTTGCCCTCCAAGTT
ATGCAGTTAAGGGAACTGCTGACGGCGATGCTTGTGAGAAAGCCACCCAACCTTCCATGGAAGCCACTCA
ACTTGTAAGAAACCAAATGAGAGAGAAATCCTATAAATACACAGAAAGTGTTAAATCCTTAAACCACTTT
ACCACTGCCCTTTGTGATAAAAAAATTAAGAAAAGAAGCAAGAGATTTTATAAAGGTAAGGACTTTGGGG
ACATCTTAGCCCTGAGCTCATCTCTTAATGAAAAAAGAAGTCATTCTGCTGAGAAACCGTATAAATGTGC
CGAATGTGGCAAGTGCTTCAAACGGAACTCCTCTCTGGTTTTACACCATCGGACTCACACTGGAGAGAAA
CCGTATACCTGTAATGATTGCGGAAAATCATTCTCCAAGAACTACAACTTGATTGTACATCGAAGGATTC
ATACAGGAGAGAAACCCTATAAATGCAGTAAGTGTGGGAAAGCTTTCAGTGATGGGTCAGCACTGACACA
ACACCAGAGGATTCACACAGGTGAGAAGCCTTATGCATGTCTAGATTGCGGAAAAACGTTCAACAGAAAT
TCATCCCTGATTTTGCATCAAAGAACTCATACAGGGGAAAAACCATATAGATGTAATGAATGTGGGAAGC
CCTTCACTGACATTTCTCACCTTACTGTGCATCTCAGAATCCACACTGGAGAGAAGCCCTATGAGTGTAG
CAGATGTGGAAAGGCTTTCCGAGATGGCTCATACCTCACTCAGCATGAGAGGACACACACTGGAGAGAAG
CCTTTTGAATGTGTAGAGTGTGGGAAATCCTTCAGTCGCAACTCTCACCTCATTGTGCATCAGAAAATTC
ATTCTGGGGAGAAGCCCTATGAATGTAAAGAGTGTGGGAAAACTTTCATTGAGAGTGCATATCTCATCAG
GCATCAGAGGGTCCACACTGGTGAGAAGCCGTACGGTTGTAACCAGTGTCGTAAACTCTTCAGGAACATT
GCTGGACTTATCCGGCACCAGAGAATTCATACTGGTGAAAGGCCTTATGAGTGCAATCAGTGTGGTAAAG
CTTTTAGGGATAGCTCCTGTCTGACCAAGCATCAGAGAATTCACACTAAGGAGACTCCATACCAGTGTCT
GAAGTGTGGAAAGTCCTTCAGACAGAACACTCACCTGGTAGTACATCAGAGACTTCATAACAGAGAGGGT
CCCAGCCAGTGTCCTCACTGTGGGAAAATATTTAGAAGGAGCTGGTGTCTTGCCCGACATCAGAGAACAC
ACCTTGAAGAGCAGCCCACGGAAACATAA

Translation (522 aa):
MEGFTREAPCFPILGDNWDCENQERNLRQSPLIDEKTEAQEANCGHVNLGEHLSTNPALLPSQRVPGTNG
FHVFNSDIKTFDCDQTLHSCPPSYAVKGTADGDACEKATQPSMEATQLVRNQMREKSYKYTESVKSLNHF
TTALCDKKIKKRSKRFYKGKDFGDILALSSSLNEKRSHSAEKPYKCAECGKCFKRNSSLVLHHRTHTGEK
PYTCNDCGKSFSKNYNLIVHRRIHTGEKPYKCSKCGKAFSDGSALTQHQRIHTGEKPYACLDCGKTFNRN
SSLILHQRTHTGEKPYRCNECGKPFTDISHLTVHLRIHTGEKPYECSRCGKAFRDGSYLTQHERTHTGEK
PFECVECGKSFSRNSHLIVHQKIHSGEKPYECKECGKTFIESAYLIRHQRVHTGEKPYGCNQCRKLFRNI
AGLIRHQRIHTGERPYECNQCGKAFRDSSCLTKHQRIHTKETPYQCLKCGKSFRQNTHLVVHQRLHNREG
PSQCPHCGKIFRRSWCLARHQRTHLEEQPTET


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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