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Report for CCDS16591.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16591.1 Public Mus musculus 2 Rmdn3 23 108 98 CCDS HistoryNCBI Gene:67809Re-query CCDS DB by CCDS ID:16591.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16591.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000094695.11 ENSMUSP00000092283.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000094695.11Link to Ensembl Protein Viewer:ENSMUSP00000092283.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000094695Re-query CCDS DB by Protein ID:ENSMUSP00000092283
Original member Current member NCBI NM_001033136.3 NP_001028308.1 Accepted alive Link to Nucleotide Sequence:NM_001033136.3Link to Protein Sequence:NP_001028308.1Re-query CCDS DB by Nucleotide ID:NM_001033136Re-query CCDS DB by Protein ID:NP_001028308Link to BLAST:NP_001028308.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028308.1 470 Q3UJU9 470 100% 0 0

Chromosomal Locations for CCDS 16591.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 119137702 119137752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119138347 119138427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119139039 119139092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119139352 119139450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119140044 119140121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119140260 119140335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119142628 119142688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119146338 119146440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119147309 119147594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119153376 119153519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119153890 119154082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119156358 119156544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1413 nt):
ATGTCTAGACTGGGGGCCCTGGGCGGCTCCCGCGCCGGGTTGGGACTGTTACTTGGTACTGCCGCCGGCC
TTGGATTCCTGTGCGTCCTTTACAGCCAGCGATGGAAACGGACCCAGCGCCATGGCCGGAGTCACAGTCT
GCCCAACTCCCTGGACTATGCGCAGGCTTCAGAGCGTGGACGCCAGGTGACACAGTTTCGGGCTATCCCA
GGTGAAGCTGGAGATGCTGCCATACTGCCCAGCCTCTCACAGGAAGGGCAGGAGAAGGTGCTGGACCGCC
TGGACTTTGTGCTGACCAGTCTTATGGCGCTGCGGCGCGAGGTGGAGGAGCTTCAGAGAAGCCTGCAAGG
ACTAGCTGGGGAGATTGTTGGGGAGGTCCGCTCTCATATAGAAGAGAACCAGAGAGTGGCCCGGCGGCGC
AGGTTCCCTTTTGCCAGAGAGAGGAGTGACTCCACGGGCTCCAGCTCTGTCTACTTCACCGCCTCCTCAG
GGGCTGCACTCACAGACGCCGAGAGCGAGGGAGGTTATACAACAGCCAACGCGGAGTCTGATTACGAGCG
GGACTCCGACAAGGAGAGTGGAGATGCTGAGGACGAAGTGAGCTGCGAGACCGTGAGGATGGGGAGGAAG
GACTCTCTGGACCTGGATGTGGAGGCGGCGTCCAGTCCGGCGGCGGCCGCCTTGGAGGAGGATGACTCCT
CAGGCCGAGAGGATGTGCAGCTGGTCCTGCTGCAGGCCGATGAGCTGCACCAGGGCAGCAAGCAGGACAA
GCGGGAAGGCTTCCAGCTGCTGCTCAACAATAAGCTGGCGTATGGAAGCCGACAAGACTTTCTGTGGCGC
CTGGCCCGGGCCTACAGTGACATGTCAGACCTTACTGAGGAGGAGAGCGGGAAGAAGTCCTATGCCCTAA
ATGGAAAAGAAGAAGCAGAGGCTGCTCTGAAGAAAGGAGATGAGAGTGCTGCGTGCCACCTGTGGTATGC
AGTGCTCTGTGGTCAGCTGGCTGAGCATGAGGGCATCTCGAAACGCATCCAGAGTGGCTTTAGCTTCAAG
GAACATGTGGACAAAGCCATTGAACTTCAGCCAGAAGACCCCAGGGGTCACTTTCTTCTTGGCAGGTGGT
GCTACCAGGTTTCTCACTTGAACTGGTTGGAAAAAAAAACGGCTACCGCCTTGTTTGAAAGCCCCCTTAG
TGCTACTGTGCAGGACGCTCTGCAGAGTTTCCTTAAGGCTGAGGAACTACAGCCAGGATTTTCAAAAGCT
GGACGGGTATATATTTCTAAGTGCTATAGAGAATTAGGAAAAAACTCTGAAGCTAGAAAGTGGATGAAGC
TGGCTCAGGAACTGCCAGACGTCACTAATGAGGATTCAGCTTTCCAAAAAGACCTGGAAGAACTAGAAGT
AATTTTAGGATAA

Translation (470 aa):
MSRLGALGGSRAGLGLLLGTAAGLGFLCVLYSQRWKRTQRHGRSHSLPNSLDYAQASERGRQVTQFRAIP
GEAGDAAILPSLSQEGQEKVLDRLDFVLTSLMALRREVEELQRSLQGLAGEIVGEVRSHIEENQRVARRR
RFPFARERSDSTGSSSVYFTASSGAALTDAESEGGYTTANAESDYERDSDKESGDAEDEVSCETVRMGRK
DSLDLDVEAASSPAAAALEEDDSSGREDVQLVLLQADELHQGSKQDKREGFQLLLNNKLAYGSRQDFLWR
LARAYSDMSDLTEEESGKKSYALNGKEEAEAALKKGDESAACHLWYAVLCGQLAEHEGISKRIQSGFSFK
EHVDKAIELQPEDPRGHFLLGRWCYQVSHLNWLEKKTATALFESPLSATVQDALQSFLKAEELQPGFSKA
GRVYISKCYRELGKNSEARKWMKLAQELPDVTNEDSAFQKDLEELEVILG


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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