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Report for CCDS56681.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56681.1 Public Mus musculus 10 Myct1 23 108 98 CCDS HistoryNCBI Gene:68632Re-query CCDS DB by CCDS ID:56681.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56681.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000051809.9 ENSMUSP00000050430.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000051809.9Link to Ensembl Protein Viewer:ENSMUSP00000050430.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000051809Re-query CCDS DB by Protein ID:ENSMUSP00000050430
Original member Current member NCBI NM_026793.2 NP_081069.1 Accepted alive Link to Nucleotide Sequence:NM_026793.2Link to Protein Sequence:NP_081069.1Re-query CCDS DB by Nucleotide ID:NM_026793Re-query CCDS DB by Protein ID:NP_081069Link to BLAST:NP_081069.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081069.1 188 Q8R411 188 100% 0 0

Chromosomal Locations for CCDS 56681.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 5593850 5593901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 5604187 5604701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (567 nt):
ATGGCTAATAACACCACGAGCTTAGGGAGTCCTTGGCCAGAAAACTTTTGGGAGGACCTTATAATGTCCT
TCACCGTATCCGTGGCGATTGGGCTTGCAATCGGAGGATTTCTCTGGGCGCTGTTCGTTTTTCTGTCTCG
AAGAAGAAGAGCCAGTGCACCCATTTCGCAGTGGAGTCCCACCAGGAGACCCAGGTCTTCCTACAACCAC
GGCCTCAACAGGACTGGGTTCTACCGCCACAGTGGCTATGAACGGCGAAGCAACCTCAGCCTGGCCAGCC
TCACTTTCCAGAGACAAGCTTCCATGGAGCTGGTCAACTCCTTCCCAAGGAAATCAAGCTTTAGGGCTTC
GACTTTCCATCCCTTCCTGCAATGCCCACCACTTCCGGTGGAAACGGAGAGTCAGCTGATGACCCTGTCT
GCCTCCACCACCCCTTCCACCCTCAGCACCGCACACAGCCCGAGCCGGCCAGACTTCCGCTGGTCCAGCA
ACAGCTTGCGGATGGGCCTTTCCACACCGCCCCCACCTGCCTATGAATCCATCATAAAGGCATTTCCCGA
TTCCTGA

Translation (188 aa):
MANNTTSLGSPWPENFWEDLIMSFTVSVAIGLAIGGFLWALFVFLSRRRRASAPISQWSPTRRPRSSYNH
GLNRTGFYRHSGYERRSNLSLASLTFQRQASMELVNSFPRKSSFRASTFHPFLQCPPLPVETESQLMTLS
ASTTPSTLSTAHSPSRPDFRWSSNSLRMGLSTPPPPAYESIIKAFPDS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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