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Report for CCDS50743.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50743.1 Public Mus musculus 2 Gins1 23 108 98 CCDS HistoryNCBI Gene:69270Re-query CCDS DB by CCDS ID:50743.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50743.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028948.4 ENSMUSP00000028948.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028948.4Link to Ensembl Protein Viewer:ENSMUSP00000028948.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000028948Re-query CCDS DB by Protein ID:ENSMUSP00000028948
Original member Current member NCBI NM_027014.1 NP_081290.1 Accepted alive Link to Nucleotide Sequence:NM_027014.1Link to Protein Sequence:NP_081290.1Re-query CCDS DB by Nucleotide ID:NM_027014Re-query CCDS DB by Protein ID:NP_081290Link to BLAST:NP_081290.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081290.1 196 Q9CZ15 196 100% 0 0

Chromosomal Locations for CCDS 50743.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 150909719 150909793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150912781 150912845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150916136 150916234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150917869 150917959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150925882 150925998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150928042 150928116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150930841 150930909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (591 nt):
ATGTTCTGCGAAAAAGCTATGGAGCTTGTCCGCGAGTTACACCGCGCGCCGGAAGGGCAGCTGCCGGCCT
TTAATGAGGACGGACTCAGACAAGTTCTGGAGGAGATGAAAGCTTTGTATGAACAAAACCAGTCTGATGT
GAATGAAGCCAAGTCAGCTGGACGAGGGGATCTGATACCAACCGTCAAATTTCGGCACTGTGCTTTGTTA
AGAAATAGACGCTGCACGATAGCATACCTGTATGACCGGTTGCTTCGGATTAGAGCACTCAGGTGGGAAT
ATGGGAGTGTCTTGCCAAATAGTTTACGATTCCACATGTCTGCTGAAGAAACGGAGTGGTTCAACCATTA
TAAAAAGTCTCTTGCTACTTACATGAGGTCGCTGGGAGGAGATGAAGGCTTGGACATCACACAAGATGTG
AAGCCCCCCAAAAGCCTATATATTGAAGTGCGGTGTTTAAAAGACTATGGAGAATTTGAAGTTGATGATG
GCACTTCAGTCCTGCTTAAAAAGAATAGTCAGCACTTTTTGCCTCGGTGGAAGTGTGAGCAGTTAATCAG
ACAAGGAGTTCTAGAGCACGTGCTGTCCTGA

Translation (196 aa):
MFCEKAMELVRELHRAPEGQLPAFNEDGLRQVLEEMKALYEQNQSDVNEAKSAGRGDLIPTVKFRHCALL
RNRRCTIAYLYDRLLRIRALRWEYGSVLPNSLRFHMSAEETEWFNHYKKSLATYMRSLGGDEGLDITQDV
KPPKSLYIEVRCLKDYGEFEVDDGTSVLLKKNSQHFLPRWKCEQLIRQGVLEHVLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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