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Report for CCDS39936.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39936.1 Public Mus musculus 7 Klk10 23 108 98 CCDS HistoryNCBI Gene:69540Re-query CCDS DB by CCDS ID:39936.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 39936.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000014058.10 ENSMUSP00000014058.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000014058.10Link to Ensembl Protein Viewer:ENSMUSP00000014058.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000014058Re-query CCDS DB by Protein ID:ENSMUSP00000014058
Original member Current member NCBI NM_133712.2 NP_598473.1 Accepted alive Link to Nucleotide Sequence:NM_133712.2Link to Protein Sequence:NP_598473.1Re-query CCDS DB by Nucleotide ID:NM_133712Re-query CCDS DB by Protein ID:NP_598473Link to BLAST:NP_598473.1

Chromosomal Locations for CCDS 39936.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 43781535 43781625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43782736 43782919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43783457 43783731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43784316 43784449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43784870 43785022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (837 nt):
ATGAGGGTCCCGCTTCTTCACCTCTCCACTGCCTCTGGCTCCTGGTCCCTGGTGAAGCTTCTGCTGCCGC
TACTGATGGTGCAACTCTGGGCGGCGCAGGCTCTGCTGCTCCCGGGAAACGCCACGCGCGTGGACCTCGA
GGCCTCCGGCGCCCAGTGCGAGCGTGACTATCATCCCTGGCAGGTCTCCCTCTTCCATAACCTCCAGTTC
CAATGTGCGGGTGTCCTGGTGGACCAGAACTGGGTGCTCACGGCCGCACATTGCTGGAGAAATAAGCCAC
TGAGAGCTCGAGTTGGCGATGACCACTTGCTGCTTTTCCAGAAGGAGCAACTGCGGTCCACGAGTTCACC
TGTTTTCCACCCCAAGTATCAGGCTTGCTCAGGCCCCATCCTGCCACATCGCTCAGATGAACACGACCTC
ATGATGCTGAAACTGAGCAGTCCTGTAATGCTGACGTCCAACGTGCATCCCGTGCAACTGCCCTTCCGCT
GCTCTCAGCCAGGGCAAGAGTGTCAGGTCTCAGGCTGGGGGACCTCAGCCAGCCGAAGAGTGAAGTACAA
TAGGAGCCTGAGCTGTTCCAAGGTAACTCTCCTTAGCCAGAAGCAGTGTGAGACCTTCTACCCAGGTGTG
ATCACCAACAGCATGATTTGTGCTGAGGCAGACGGAAACCAAGACTCTTGCCAGAGTGACTCCGGTGGCC
CCCTGGTGTGTGATGACACCCTGCATGGCGTCCTCTCGTGGGGCATTTACCCATGTGGTGCTGCCCAGCA
CCCATCTGTCTACTCAGAGATCTGCAAATACACCCCCTGGATCCGAAGAGTCATTCGTTTCAAATGA

Translation (278 aa):
MRVPLLHLSTASGSWSLVKLLLPLLMVQLWAAQALLLPGNATRVDLEASGAQCERDYHPWQVSLFHNLQF
QCAGVLVDQNWVLTAAHCWRNKPLRARVGDDHLLLFQKEQLRSTSSPVFHPKYQACSGPILPHRSDEHDL
MMLKLSSPVMLTSNVHPVQLPFRCSQPGQECQVSGWGTSASRRVKYNRSLSCSKVTLLSQKQCETFYPGV
ITNSMICAEADGNQDSCQSDSGGPLVCDDTLHGVLSWGIYPCGAAQHPSVYSEICKYTPWIRRVIRFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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