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Report for CCDS24234.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24234.1 Public Mus musculus 10 Dctn2 23 108 98 CCDS HistoryNCBI Gene:69654Re-query CCDS DB by CCDS ID:24234.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24234.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026479.10 ENSMUSP00000026479.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026479.10Link to Ensembl Protein Viewer:ENSMUSP00000026479.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000026479Re-query CCDS DB by Protein ID:ENSMUSP00000026479
Original member Current member NCBI NM_027151.2 NP_081427.1 Accepted alive Link to Nucleotide Sequence:NM_027151.2Link to Protein Sequence:NP_081427.1Re-query CCDS DB by Nucleotide ID:NM_027151Re-query CCDS DB by Protein ID:NP_081427Link to BLAST:NP_081427.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081427.1 402 Q99KJ8 402 100% 0 0

Chromosomal Locations for CCDS 24234.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 127266499 127266534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127267414 127267482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127274714 127274810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127274994 127275055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127275824 127275922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127276384 127276544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127276702 127276849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127277255 127277320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127277487 127277525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127277695 127277772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127277867 127277938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127278120 127278222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127278317 127278408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127281401 127281487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1209 nt):
ATGGCGGACCCTAAATACGCCGATCTCCCCGGCATTGCCAGGAATGAGCCAGACGTTTATGAAACCAGCG
ACCTACCTGAGGATGATCAAGCAGAGTTTGATGCGGAGGAACTGAGCAGCACAAGCGTGGAACACATCAT
TGTCAACCCCAACGCTGCCTACGACAAGTTCAAGGACAAGAGAGTGGGAACAAAGGGGCTTGATTTCTCA
GATCGCATTGGAAAGACCAAGAGGACAGGATATGAGTCTGGAGACTATGAAATGCTTGGAGAGGGTCTGG
GAGTGAAGGAGACACCGCAGCAGAAGTACCAACGACTACTGCATGAAGTCCAAGAGCTGACAACTGAGGT
GGAGAAGATCAAGACGACAGTGAAGGAGTCAGCCACCGAGGAGAAGCTCACCCCTGTGGTGCTGGCTAAG
CAGCTGGCTGCCCTGAAGCAGCAGCTGGTGGCTTCCCACCTGGAGAAGCTTCTGGGACCAGATGCTGCAA
TCAACCTTGCCGACCCAGACGGAGCCCTAGCTAAGCGCTTACTGCTGCAGCTGGAAGCAACTAAGAGCAG
CAAAGGCAGTTCAGGGGGTAAGGCTACAGCTGGGGCCCCCCCAGACAGCAGCCTGGTCACCTATGAACTC
CACTCACGGCCTGAGCAGGACAAGTTCTCTCAAGCTGCCAAAGTTGCAGAACTCGAGAAGCGTCTGACAG
AGCTGGAGGCCACTGTCCGATGTGACCAGGATGCTCAGAATCCCCTTTCTGCAGGTCTACAGGGAGCCTG
CCTTATGGAAACGGTAGAACTGTTGCAAGCCAAAGTGAGTGCCCTGGACCTTGCAGTTCTGGACCAAGTA
GAGGCTCGGCTTCAGAGTGTCCTGGGAAAGGTGAATGAGATTGCTAAGCACAAGGCATCCGTGGAGGACG
CAGACACTCAGAACAAGGTGCACCAGCTCTATGAGACCATCCAGCGCTGGAGCCCAGTCGCCTCCACCCT
CCCTGAACTGGTACAGCGACTTGTCACCATCAAGCAGCTGCATGAGCAAGCTATGCAGTTTGGTCAGCTC
CTGACACACTTGGATACCACCCAGCAGATGATGGCCAGTTCCCTTAAGGATAATACTGCTCTCCTGACCC
AGGTGCAGACAACGATGCGTGAAAACTTGGCCACAGTTGAGGGGAACTTTGCCAGCATTGATGCTCGGAT
GAAGAGGCTGGGAAAGTGA

Translation (402 aa):
MADPKYADLPGIARNEPDVYETSDLPEDDQAEFDAEELSSTSVEHIIVNPNAAYDKFKDKRVGTKGLDFS
DRIGKTKRTGYESGDYEMLGEGLGVKETPQQKYQRLLHEVQELTTEVEKIKTTVKESATEEKLTPVVLAK
QLAALKQQLVASHLEKLLGPDAAINLADPDGALAKRLLLQLEATKSSKGSSGGKATAGAPPDSSLVTYEL
HSRPEQDKFSQAAKVAELEKRLTELEATVRCDQDAQNPLSAGLQGACLMETVELLQAKVSALDLAVLDQV
EARLQSVLGKVNEIAKHKASVEDADTQNKVHQLYETIQRWSPVASTLPELVQRLVTIKQLHEQAMQFGQL
LTHLDTTQQMMASSLKDNTALLTQVQTTMRENLATVEGNFASIDARMKRLGK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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