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Report for CCDS26836.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26836.1 Public Mus musculus 14 Nkiras1 23 108 98 CCDS HistoryNCBI Gene:69721Re-query CCDS DB by CCDS ID:26836.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26836.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000132374.8 ENSMUSP00000121496.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000132374.8Link to Ensembl Protein Viewer:ENSMUSP00000121496.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000132374Re-query CCDS DB by Protein ID:ENSMUSP00000121496
Original member Current member NCBI NM_023526.4 NP_076015.2 Accepted alive Link to Nucleotide Sequence:NM_023526.4Link to Protein Sequence:NP_076015.2Re-query CCDS DB by Nucleotide ID:NM_023526Re-query CCDS DB by Protein ID:NP_076015Link to BLAST:NP_076015.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_076015.2 192 Q8CEC5 192 100% 0 0

Chromosomal Locations for CCDS 26836.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 18276713 18276806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 18278304 18278545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 18279947 18280189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (579 nt):
ATGGGGAAGGGTTGCAAGGTTGTCATTTGTGGGTTGCTGTCTGTTGGGAAAACTGCAATTTTGGAGCAAC
TCCTTTATGGGAATCACACTATTGGGATGGAAGACTGTGAAACGCTGGAAGACGTGTACATGGCATCTGT
AGAGACAGACCGTGGGGTGAAGGAGCAGCTGCACTTGTATGACACCCGAGGCCTGCAGAAAGGCGTGGAG
CTGCCAAAGCATTACTTCTCATTTGCTGATGGCTTTGTTCTTGTGTATAGTGTGAATAACCTTGAGTCCT
TCCAAAGAGTGGAGCTTCTGAAGAAAGAGATTGATAAGTTCAAAGACAAAAAGGAGGTGGCAATCGTTGT
GTTAGGAAACAAACTGGACCTTTCTGAGCAGAGACAGGTGGATGCTGACGTGGCACAACAGTGGGCAAGA
AGTGAGAAAGTCAAGCTGTGGGAGGTGACAGTGACAGACCGGAGGACACTGATTGAACCCTTCACTTTAC
TGGCCAGCAAGCTTTCTCAGCCCCAGAGCAAATCCAGCTTCCCTTTGCCTGGGAGGAAAAACAAAGGGAA
CTCCAATCCCGAAAACTGA

Translation (192 aa):
MGKGCKVVICGLLSVGKTAILEQLLYGNHTIGMEDCETLEDVYMASVETDRGVKEQLHLYDTRGLQKGVE
LPKHYFSFADGFVLVYSVNNLESFQRVELLKKEIDKFKDKKEVAIVVLGNKLDLSEQRQVDADVAQQWAR
SEKVKLWEVTVTDRRTLIEPFTLLASKLSQPQSKSSFPLPGRKNKGNSNPEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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