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Report for CCDS36779.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36779.1 Public Mus musculus 13 Elovl7 23 108 98 CCDS HistoryNCBI Gene:74559Re-query CCDS DB by CCDS ID:36779.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36779.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022207.9 ENSMUSP00000022207.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022207.9Link to Ensembl Protein Viewer:ENSMUSP00000022207.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000022207Re-query CCDS DB by Protein ID:ENSMUSP00000022207
Original member Current member NCBI NM_029001.5 NP_083277.3 Accepted alive Link to Nucleotide Sequence:NM_029001.5Link to Protein Sequence:NP_083277.3Re-query CCDS DB by Nucleotide ID:NM_029001Re-query CCDS DB by Protein ID:NP_083277Link to BLAST:NP_083277.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083277.3 281 Q9D2Y9 281 100% 0 0

Chromosomal Locations for CCDS 36779.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 108256735 108256798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 108267190 108267380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 108270633 108270713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 108271805 108271861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 108274286 108274391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 108279577 108279713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 108282472 108282681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (846 nt):
ATGGCGTTCAGTGATCTTACATCGAGGACTGTGCGTTTTTATGATAATTGGATCAAAGATGCTGATCCGA
GAGTTGAAGACTATCTCCTCATGTCCTCGCCTCTGCCACAAACCATCATCCTGGGCCTCTATGTCTATTT
TGTTACGTCTCTGGGACCAAAGCTCATGGAGAACCGGAAGCCCTTTGAACTCAAGAAAGCGATGATAACG
TACAATTTTTTCATAGTACTGTTTTCTGTGTATATGTGTTATGAGTTTGTGATGTCTGGCTGGGGTACAG
GTTACTCGTTTCGATGTGACATTGTTGACTATTCTCAGTCGCCAAGAGCAATGAGGATGGTGCACACCTG
CTGGCTTTATTACTTCTCCAAATTCATCGAGCTGTTAGACACTATCTTTTTTGTTCTGCGTAAGAAAAAC
AGCCAAGTGACTTTCCTTCATGTCTTCCATCATACGATCATGCCGTGGACCTGGTGGTTTGGAGTCAAAT
TTGCTGCAGGTGGTCTGGGAACATTCCATGCCTTTTTAAATACAGCTGTGCACGTGGTCATGTATTCTTA
CTATGGGTTATGTGCAATGGGACCAGCCTACCAGAAGTATTTATGGTGGAAAAAACATTTGACATCTTTG
CAGCTTGTCCAGTTTGTTCTTGTCACTATCCACATAGGCCAGATCTTCTTCATGGAGGACTGCAATTACC
AGTACCCAGTTTTTCTGTATATCATCATGAGTTACGGATGCATCTTCCTGCTGCTCTTTCTCCACTTTTG
GTACCGTGCTTACACCAAGGGTCAGAGGTTGCCCAAAACTCTAGAAAATGGAAATTGCAAAAGCAAGCGC
CACTAA

Translation (281 aa):
MAFSDLTSRTVRFYDNWIKDADPRVEDYLLMSSPLPQTIILGLYVYFVTSLGPKLMENRKPFELKKAMIT
YNFFIVLFSVYMCYEFVMSGWGTGYSFRCDIVDYSQSPRAMRMVHTCWLYYFSKFIELLDTIFFVLRKKN
SQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHAFLNTAVHVVMYSYYGLCAMGPAYQKYLWWKKHLTSL
QLVQFVLVTIHIGQIFFMEDCNYQYPVFLYIIMSYGCIFLLLFLHFWYRAYTKGQRLPKTLENGNCKSKR
H


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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