NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS38756.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38756.1 Public Mus musculus 4 Igfbpl1 23 108 98 CCDS HistoryNCBI Gene:75426Re-query CCDS DB by CCDS ID:38756.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 38756.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000044297.6 ENSMUSP00000036974.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000044297.6Link to Ensembl Protein Viewer:ENSMUSP00000036974.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000044297Re-query CCDS DB by Protein ID:ENSMUSP00000036974
Original member Current member NCBI NM_018741.2 NP_061211.1 Accepted alive Link to Nucleotide Sequence:NM_018741.2Link to Protein Sequence:NP_061211.1Re-query CCDS DB by Nucleotide ID:NM_018741Re-query CCDS DB by Protein ID:NP_061211Link to BLAST:NP_061211.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061211.1 270 Q80W15 270 100% 0 0

Chromosomal Locations for CCDS 38756.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 45813401 45813550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 45815472 45815588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 45816278 45816387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 45826358 45826793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (813 nt):
ATGCCGCGTCTGCCGCTGCTGCTCCTGCTCCTGCCATCACTGGCCCGGGGTCTCGGGCTCCGCGACGCGG
GTAGACGACACCCCGAGTGCAGCCCGTGCCAGCAGGATCGCTGCCCTGCGCCCTCGCCTTGCCCAGCGCC
CTGGATCTCCGCGCGCGACGAGTGCGGCTGCTGCGCGCGCTGCCTGGGCGCCGAGGGCGCGAGTTGCGGG
GGACCCGTGGGCTCACGCTGTGGCCCTGGCCTGGTGTGTGCGAGTCGCGCCTCGGGGACGGCGCCCGAGG
GCACCGGGCTTTGCGTGTGCGCGCAACGCGGCGCCGTCTGCGGCTCTGACGGCCGCTCCTACTCCAGCAT
CTGCGCGCTACGTCTGCGCGCCCGACATGCACCCCGCGCGCACCATGGCCACCTGCACAAGGCTCGCGAT
GGGCCCTGCGAGTTCGCTCCCGTGGTCCTCATGCCCCCTCGAGATATTCACAATGTCACTGGGACTCAAG
TATTCCTTTCCTGTGAGGTGAAGGCTGTGCCCACCCCGGTCATCACCTGGAAGAAGGTCAAGCACTCTCC
AGAGGGCACCGAGGGGTTGGAGGAGTTGCCCGGAGACCATGTCAATATAGCTGTCCAGGTGCGAGGGGGC
CCTTCTGACCATGAGACCACATCCTGGATTTTGATCAACCCTCTGAGGAAGGAAGATGAGGGAGTGTACC
ACTGCCACGCAGCCAACGCCATTGGAGAGGCTCAGTCCCACGGCACGGTGACGGTCCTCGATCTGAACAG
ATACAAAAGCCTCTACTCCTCAGTTCCGGGTGACCTCCTGTGA

Translation (270 aa):
MPRLPLLLLLLPSLARGLGLRDAGRRHPECSPCQQDRCPAPSPCPAPWISARDECGCCARCLGAEGASCG
GPVGSRCGPGLVCASRASGTAPEGTGLCVCAQRGAVCGSDGRSYSSICALRLRARHAPRAHHGHLHKARD
GPCEFAPVVLMPPRDIHNVTGTQVFLSCEVKAVPTPVITWKKVKHSPEGTEGLEELPGDHVNIAVQVRGG
PSDHETTSWILINPLRKEDEGVYHCHAANAIGEAQSHGTVTVLDLNRYKSLYSSVPGDLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH