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Report for CCDS46723.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46723.1 Public Homo sapiens 22 MPPED1 24 110 108 CCDS HistoryNCBI Gene:758Re-query CCDS DB by CCDS ID:46723.1See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46723.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000417669.6 ENSP00000388137.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000417669.6Link to Ensembl Protein Viewer:ENSP00000388137.1Re-query CCDS DB by Nucleotide ID:ENST00000417669Re-query CCDS DB by Protein ID:ENSP00000388137
Original member Current member EBI ENST00000443721.2 ENSP00000400686.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000443721.2Link to Ensembl Protein Viewer:ENSP00000400686.1Re-query CCDS DB by Nucleotide ID:ENST00000443721Re-query CCDS DB by Protein ID:ENSP00000400686
Original member Current member NCBI NM_001044370.2 NP_001037835.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001044370.2Link to Protein Sequence:NP_001037835.1Re-query CCDS DB by Nucleotide ID:NM_001044370Re-query CCDS DB by Protein ID:NP_001037835Link to BLAST:NP_001037835.1
Original member Current member NCBI NM_001362786.2 NP_001349715.1 Accepted alive Link to Nucleotide Sequence:NM_001362786.2Link to Protein Sequence:NP_001349715.1Re-query CCDS DB by Nucleotide ID:NM_001362786Re-query CCDS DB by Protein ID:NP_001349715Link to BLAST:NP_001349715.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001037835.1 326 O15442-1 326 100% 0 0
NP_001349715.1 326 O15442-1 326 100% 0 0

Chromosomal Locations for CCDS 46723.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 43424986 43425209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43435034 43435215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43474736 43474961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43498235 43498350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43502644 43502757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43505498 43505616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (981 nt):
ATGTGGCGCTCTAGGTGGGATGCCAGCGTCCTGAAGGCGGAGGCCCTGGCCCTCCTCCCCTGCGGCCTGG
GCATGGCATTCTCCCAGTCCCACGTGATGGCCGCTCGGCGGCACCAGCACAGCCGGCTCATCATCGAGGT
GGACGAGTACAGCTCCAACCCCACCCAGGCCTTCACCTTCTACAACATCAACCAGGGCCGCTTCCAGCCA
CCGCATGTGCAGATGGTGGACCCGGTGCCTCACGATGCCCCCAAACCTCCAGGCTACACCCGCTTCGTCT
GCGTCTCTGATACCCACTCGAGGACGGACCCCATCCAGATGCCGTACGGCGACGTGCTGATCCACGCTGG
GGACTTCACTGAGCTGGGGCTCCCGAGCGAGGTGAAGAAGTTCAACGAGTGGCTGGGCAGCCTGCCCTAC
GAGTACAAGATCGTGATCGCAGGCAACCACGAGCTGACCTTTGACCAGGAGTTCATGGCCGACCTCATCA
AGCAGGACTTTTACTACTTCCCATCTGTGTCGAAGCTGAAGCCGGAGAACTATGAGAATGTGCAGTCGCT
GCTGACCAACTGCATCTACCTTCAGGACTCGGAGGTCACCGTGCGGGGCTTCCGGATCTATGGCTCCCCA
TGGCAGCCCTGGTTCTACGGCTGGGGCTTCAACCTCCCGCGAGGCCAAGCCCTGCTGGAGAAATGGAACC
TCATTCCCGAAGGCGTAGACATCCTGATAACCCATGGACCACCACTGGGCTTCCTGGACTGGGTCCCCAA
GAAGATGCAGCGGGTGGGCTGTGTGGAGCTGCTCAACACGGTGCAGAGGCGCGTCCAGCCGCGGTTACAT
GTCTTTGGCCACATCCACGAAGGGTATGGTGTCATGGCAGATGGGACGACCACCTATGTGAATGCGTCCG
TATGCACTGTGAACTACCAGCCCGTGAACCCGCCCATAGTCATCGACCTCCCCACACCCCGGAACTCCTG
A

Translation (326 aa):
MWRSRWDASVLKAEALALLPCGLGMAFSQSHVMAARRHQHSRLIIEVDEYSSNPTQAFTFYNINQGRFQP
PHVQMVDPVPHDAPKPPGYTRFVCVSDTHSRTDPIQMPYGDVLIHAGDFTELGLPSEVKKFNEWLGSLPY
EYKIVIAGNHELTFDQEFMADLIKQDFYYFPSVSKLKPENYENVQSLLTNCIYLQDSEVTVRGFRIYGSP
WQPWFYGWGFNLPRGQALLEKWNLIPEGVDILITHGPPLGFLDWVPKKMQRVGCVELLNTVQRRVQPRLH
VFGHIHEGYGVMADGTTTYVNASVCTVNYQPVNPPIVIDLPTPRNS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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