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Report for CCDS53192.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53192.1 Public Mus musculus X Arxes1 23 108 98 CCDS HistoryNCBI Gene:76219Re-query CCDS DB by CCDS ID:53192.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53192.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000057625.2 ENSMUSP00000062660.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000057625.2Link to Ensembl Protein Viewer:ENSMUSP00000062660.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000057625Re-query CCDS DB by Protein ID:ENSMUSP00000062660
Original member Current member NCBI NM_029541.3 NP_083817.1 Accepted alive Link to Nucleotide Sequence:NM_029541.3Link to Protein Sequence:NP_083817.1Re-query CCDS DB by Nucleotide ID:NM_029541Re-query CCDS DB by Protein ID:NP_083817Link to BLAST:NP_083817.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083817.1 180 C0HK79 180 100% 0 0

Chromosomal Locations for CCDS 53192.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 136033506 136034048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (543 nt):
ATGAACTCCCTGCTGTCCCGGGCCAACTCGCTGTTCGCCTTCACGCTGAGCGTCATGGCGGCGCTCACCT
TGGGCTGCATCCTCACCACCGCCTTCAAAGACAGGAGCGCGCCCGTGCGCCTGCACGTCTCCAGGATCCT
GCTCAAAAAAGTGGAAGACTTCACCGGACCCAGAAAGAAGAGCGACCTGGGCTTCATCACCTTCCACATC
TCTGCGGATCTGGAGAAGACTTTCGACTGGAACGTCAAGCAGCTCTTCCTTTATCTGTCGGCAGAATATT
CCACCAAAAGCAACGCTGTGAACCAGGTGGTCCTCTGGGACAAGATCCTTCTGCGAGGCGAGAACCCCAA
GCTGAACCTGAAAGACGTCAAAAGCAAGTATTTTTTCTTTGACGATGGACACGGGCTCAAGGGAAACAGG
AATGTCACTTTGACTCTCTCCTGGCAAGTGATACCGATTGCTGGGATCCTGCCTCTTGTGACTGGATCTG
GACGCGTGTCTGTCCCGTTTCCAGATTCCTATGAAATAGCCACGACTTTTTGA

Translation (180 aa):
MNSLLSRANSLFAFTLSVMAALTLGCILTTAFKDRSAPVRLHVSRILLKKVEDFTGPRKKSDLGFITFHI
SADLEKTFDWNVKQLFLYLSAEYSTKSNAVNQVVLWDKILLRGENPKLNLKDVKSKYFFFDDGHGLKGNR
NVTLTLSWQVIPIAGILPLVTGSGRVSVPFPDSYEIATTF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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