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Report for CCDS18165.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18165.1 Public Mus musculus 4 Erp44 23 108 98 CCDS HistoryNCBI Gene:76299Re-query CCDS DB by CCDS ID:18165.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18165.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030028.4 ENSMUSP00000030028.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030028.4Link to Ensembl Protein Viewer:ENSMUSP00000030028.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000030028Re-query CCDS DB by Protein ID:ENSMUSP00000030028
Original member Current member NCBI NM_029572.3 NP_083848.1 Accepted alive Link to Nucleotide Sequence:NM_029572.3Link to Protein Sequence:NP_083848.1Re-query CCDS DB by Nucleotide ID:NM_029572Re-query CCDS DB by Protein ID:NP_083848Link to BLAST:NP_083848.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083848.1 406 Q9D1Q6 406 100% 0 0

Chromosomal Locations for CCDS 18165.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 48194608 48194709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 48196803 48196905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 48204144 48204285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 48205118 48205229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 48208697 48208813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 48211650 48211707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 48218081 48218196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 48219343 48219527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 48236873 48236988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 48241296 48241335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 48243477 48243549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 48279384 48279440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1221 nt):
ATGAATCCTGCGGTCTTCCTGTCTTTAGCAGACCTCAGATGCTCCTTGCTGCTCCTGGTAACTTCAATTT
TTACACCTATAACAGCTGAAATAGCAAGTCTTGATTCAGAGAATATAGATGAAATTTTAAATAATGCTGA
TGTTGCTTTAGTAAATTTTTATGCTGACTGGTGTCGTTTCAGCCAGATGTTGCATCCAATTTTTGAGGAA
GCATCTGATGTCATTAAGGAAGAATATCCAGATAAAAATCAAGTAGTGTTTGCCAGAGTTGATTGTGATC
AGCACTCTGATATAGCCCAGAGGTACAGGATAAGCAAATACCCAACCCTGAAATTATTTCGTAATGGAAT
GATGATGAAGAGAGAATACAGGGGCCAGCGATCAGTGAAAGCGCTTGCAGACTACATCAGGCAACAGAAA
AGTAACCCAGTCCACGAGATTCAGAGTCTAGATGAAGTCACCAATCTTGATCGCAGTAAGAGAAATATCA
TTGGATACTTTGAGCAGAAGGATTCAGAAAATTACAGAGTTTTTGAAAGAGTAGCAAGTATTTTGCATGA
TGACTGTGCCTTCCTTTCTGCTTTTGGAGATCTTTCAAAACCAGAAAGGTACAACGGAGACAATGTAATC
TACAAACCACCCGGGCGTTCTGCGCCAGACATGGTGTACTTGGGATCTATGACAAATTTTGATGTAACTT
ACAACTGGATTCAAGATAAATGTGTCCCTCTTGTCCGAGAAATAACATTTGAAAATGGAGAGGAATTGAC
AGAAGAAGGACTGCCTTTTCTCATACTCTTCCACATGAAGGATGATACAGAAAGTTTAGAAATATTCCAG
AATGAAGTAGCCCGGCAGTTGATAAGTGAAAAAGGTACAATAAATTTCTTACATGCAGATTGTGACAAAT
TTAGACATCCTCTTCTCCATATCCAGAAAACGCCAGCAGATTGCCCTGTCATAGCCATTGACAGTTTTAG
GCATATGTATGTTTTTGGAGACTTTAAGGATGTATTAATTCCTGGAAAACTCAAGCAGTTTGTATTTGAC
CTACATTCTGGAAAATTACACAGAGAATTCCATCACGGACCTGACCCGACTGACACAGCCCCAGGAGAGC
AAGACCAGGATGTAGCGAGCAGTCCTCCAGAGAGCTCCTTCCAGAAGCTGGCGCCCAGCGAGTATAGGTA
TACTTTATTGAGGGATCGAGATGAGCTGTAA

Translation (406 aa):
MNPAVFLSLADLRCSLLLLVTSIFTPITAEIASLDSENIDEILNNADVALVNFYADWCRFSQMLHPIFEE
ASDVIKEEYPDKNQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQK
SNPVHEIQSLDEVTNLDRSKRNIIGYFEQKDSENYRVFERVASILHDDCAFLSAFGDLSKPERYNGDNVI
YKPPGRSAPDMVYLGSMTNFDVTYNWIQDKCVPLVREITFENGEELTEEGLPFLILFHMKDDTESLEIFQ
NEVARQLISEKGTINFLHADCDKFRHPLLHIQKTPADCPVIAIDSFRHMYVFGDFKDVLIPGKLKQFVFD
LHSGKLHREFHHGPDPTDTAPGEQDQDVASSPPESSFQKLAPSEYRYTLLRDRDEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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