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Report for CCDS52693.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52693.1 Public Mus musculus 8 Fbxo31 23 108 98 CCDS HistoryNCBI Gene:76454Re-query CCDS DB by CCDS ID:52693.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52693.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000059018.13 ENSMUSP00000057573.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000059018.13Link to Ensembl Protein Viewer:ENSMUSP00000057573.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000059018Re-query CCDS DB by Protein ID:ENSMUSP00000057573
Original member NCBI NM_133765.4 NP_598526.3 Updated not alive Link to Nucleotide Sequence:NM_133765.4Link to Protein Sequence:NP_598526.3Re-query CCDS DB by Nucleotide ID:NM_133765Re-query CCDS DB by Protein ID:NP_598526
Current member NCBI NM_133765.5 NP_598526.3 Accepted alive Link to Nucleotide Sequence:NM_133765.5Link to Protein Sequence:NP_598526.3Re-query CCDS DB by Nucleotide ID:NM_133765Re-query CCDS DB by Protein ID:NP_598526Link to BLAST:NP_598526.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598526.3 507 Q3TQF0 507 100% 0 0

Chromosomal Locations for CCDS 52693.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 121552223 121552445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 121554105 121554451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 121555206 121555359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 121556242 121556351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 121559020 121559094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 121559923 121560090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 121560386 121560462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 121566275 121566346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 121578458 121578755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1524 nt):
ATGGCGGTGTGTGCTCGGCTCTGCGGCGTGGGCCCCGCGCGTGGGTGCCGCCGCCGCCAGCAGCGCCGCG
GCCCGGCCGAGACTGCGGCGGCGGACAGTGAGGCGGACACGGACCCCGAGGAGGAGCGCATCGAGGCGGG
GCCGGCGCGTTGCTCTCTGCTGGAGCTCCCGCCTGAGCTGCTCGTGGAGATCTTCGCGTCGCTGCCCGGC
ACCGACCTGCCCAGCCTGGCTCAGGTCTGCAGCAGGTTCCGCCGAATCTTGCACACGGACACCATCTGGA
GACGGCGCTGCCGCGAGGAGTATGGCGTTTGTGAGAACCTGCGGAAGCTGGAGATCACAGGTGTGTCTTG
CCGGGACGTCTATGCAAAACTGCTTCACCGATACAGACACATTTTGGGGCTGTGGCAGCCAGATATCGGG
CCGTACGGAGGATTGCTGAACGTCGTGGTGGACGGACTGTTCATCATTGGCTGGATGTACCTGCCACCTC
ATGACCCCCACGTGGGAGACCCCATGCGGTTCAAGCCACTGTTTAGAATCCATCTGATGGAGAGGAAGTC
GGCTACAGTGGAGTGTATGTACGGCCACAAAGGGCCCCACAACGGCCACATCCAGATTGTGAAGAGGGAC
GAGTTCTCCACCAAGTGTAACCAGACAGATCACCACAGGATGTCCGGTGGGAGGCAGGAGGAGTTTCGGA
CGTGGCTGAGGGAGGAGTGGGGCCGCACGCTGGAAGACATCTTCCACGAGCACATGCAGGAGCTGATTCT
GATGAAGTTCATCTACACCAGTCAGTACGACAACTGCCTGACCTACCGACGGATCTACCTCCCGCCCAGC
CACCCTGACGACCTCATCAAGCCCGGCCTCTTCAAGGGCACCTATGGCAGCCACGGGCTGGAGATTGTGA
TGCTCAGCTTCCACGGCTCACGCGCCAGGGGCACCAAGATCACGGGCGACCCCAACATCCCCGCGGGGCA
GCAGACTGTAGAGATTGACCTGCAGCGCCGCATCCAGCTGCCGGACGTGGAGAACCTCCGAAACTTCAAC
GAGCTCTCCAGGATTGTCCTGGAGGTCCGGGAGCAGGTGCGGCAGGAGCAGGAGGCCGGCGAGGGCGCCG
CGCCACCCCGGGAGCCTTCAGCCAAGGCCGCTGATGGGCCACCTGCTAAGGACGGCAAAGAGCCTGGAGG
TGGAGCCGAGGCAGCTGAGCAGTCGGCCTCGTCTGGGCAGGGGCAGCCGTTTGTGCTTCCTGTGGGTGTC
AGCTCGAGGAACGAGGATTACCCCCGCACTTGCCGCCTATGTTTCTATGGCACAGGCCTCATCGCTGGCC
ACGGCTTTACCAGCCCTGAGCGCACCCCCGGAGTCTTCGTCCTGTTTGATGAGGACCGCTTTGGATTTCT
GTGGCTGGAATTGAAGTCCTTCAGCTTGTACAGCCGAGTCCAGGCCACCTTCCAGAACGCCGCCGCGCCG
TCGCCGCAGGCCTTTGACGAGATGCTCAGGAACATCCAGTCTCTCACCTCCTGA

Translation (507 aa):
MAVCARLCGVGPARGCRRRQQRRGPAETAAADSEADTDPEEERIEAGPARCSLLELPPELLVEIFASLPG
TDLPSLAQVCSRFRRILHTDTIWRRRCREEYGVCENLRKLEITGVSCRDVYAKLLHRYRHILGLWQPDIG
PYGGLLNVVVDGLFIIGWMYLPPHDPHVGDPMRFKPLFRIHLMERKSATVECMYGHKGPHNGHIQIVKRD
EFSTKCNQTDHHRMSGGRQEEFRTWLREEWGRTLEDIFHEHMQELILMKFIYTSQYDNCLTYRRIYLPPS
HPDDLIKPGLFKGTYGSHGLEIVMLSFHGSRARGTKITGDPNIPAGQQTVEIDLQRRIQLPDVENLRNFN
ELSRIVLEVREQVRQEQEAGEGAAPPREPSAKAADGPPAKDGKEPGGGAEAAEQSASSGQGQPFVLPVGV
SSRNEDYPRTCRLCFYGTGLIAGHGFTSPERTPGVFVLFDEDRFGFLWLELKSFSLYSRVQATFQNAAAP
SPQAFDEMLRNIQSLTS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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