NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS37155.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37155.1 Public Mus musculus 15 Ccdc134 23 108 98 CCDS HistoryNCBI Gene:76457Re-query CCDS DB by CCDS ID:37155.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37155.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000089174.5 ENSMUSP00000086578.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000089174.5Link to Ensembl Protein Viewer:ENSMUSP00000086578.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000089174Re-query CCDS DB by Protein ID:ENSMUSP00000086578
Original member Current member NCBI NM_172428.2 NP_766016.2 Accepted alive Link to Nucleotide Sequence:NM_172428.2Link to Protein Sequence:NP_766016.2Re-query CCDS DB by Nucleotide ID:NM_172428Re-query CCDS DB by Protein ID:NP_766016Link to BLAST:NP_766016.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766016.2 229 Q8C7V8-1 229 100% 0 0

Chromosomal Locations for CCDS 37155.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 82130068 82130170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82131424 82131545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82131745 82131829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82134581 82134762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82135070 82135141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82140866 82140991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (690 nt):
ATGGACCTTCTTCAGTTCCTGGCAGCCTTCTCTGTCCTCCTGTGGCCTGGCACGGAAGTCACAGGCGCCC
TG
AAGAGCACTCTGGACCCGAGCCTCAAGATTTACAAGAAGATGTTTGAGGTGAAGCGGCGAGAGCAGCT
G
TTGGCACTGAAGAACCTGGCGCAGCTGAATGACATCCACCAGCAGTACAAGATCCTGGATGTCATGCTT
AAG
GGACTCTTCAAGGTGCTGGAGGACTCCCGCACAGTGCTCATTGCTGCCGATGTGCTTCCAGACGGGC
CG
GTCCCCCAGGATGAGAAGCTGAAGGATGCTTTCTCGCACGTGGTGGAGAACACAGCCTTTTTTGGTGA
C
GTCGTGCTGCGCTTCCCAAAGATTGTCCACCACTACTTTGACCATAATTCCAACTGGAACCTCCTGATC
CGC
TGGGGCATCAGCTTCTGCAACCAGACAGGCGTCTTTGACCAGGGGCCCCACTCACCCATCCTCAGCC
TG
ATGGCCCAGGAGCTGGGGATCACTGAGAAAGATTCTGACTTCCGGAACCCGTTTAAAACAGACCAGAC
A
GAGTTTATTCCTAGCACCGACCCTTTCCAGAAGGCTTTGAGGGAAGAAGAAAAACGCCGCAAGAAGGAG
GAG
AGGCGGAAGGAGATCCGGAAAGGCCCGAGGATTTCAAGATCCCAGTCTGAGTTGTAG


Translation (229 aa):
MDLLQFLAAFSVLLWPGTEVTGALKSTLDPSLKIYKKMFEVKRREQLLALKNLAQLNDIHQQYKILDVML
K
GLFK
VLEDSRTVLIAADVLPDGPVPQDEKLKDAFSHVVENTAFFGDVVLRFPKIVHHYFDHNSNWNLLI
R
WGISFCNQTGVFDQGPHSPILSL
MAQELGITEKDSDFRNPFKTDQTEFIPSTDPFQKALREEEKRRKKE
E
RRKEIRKGPRISRSQSEL




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser