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Report for CCDS30628.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30628.1 Public Homo sapiens 1 LUZP1 24 110 108 CCDS HistoryNCBI Gene:7798Re-query CCDS DB by CCDS ID:30628.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30628.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302291.8 ENSP00000303758.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000302291.8Link to Ensembl Protein Viewer:ENSP00000303758.4Re-query CCDS DB by Nucleotide ID:ENST00000302291Re-query CCDS DB by Protein ID:ENSP00000303758
Original member Current member NCBI NM_001142546.4 NP_001136018.1 Accepted alive Link to Nucleotide Sequence:NM_001142546.4Link to Protein Sequence:NP_001136018.1Re-query CCDS DB by Nucleotide ID:NM_001142546Re-query CCDS DB by Protein ID:NP_001136018Link to BLAST:NP_001136018.1
Original member Current member NCBI NM_001395461.1 NP_001382390.1 Accepted alive Link to Nucleotide Sequence:NM_001395461.1Link to Protein Sequence:NP_001382390.1Re-query CCDS DB by Nucleotide ID:NM_001395461Re-query CCDS DB by Protein ID:NP_001382390Link to BLAST:NP_001382390.1
Original member NCBI NM_001395462.1 NP_001382391.1 Updated not alive Link to Nucleotide Sequence:NM_001395462.1Link to Protein Sequence:NP_001382391.1Re-query CCDS DB by Nucleotide ID:NM_001395462Re-query CCDS DB by Protein ID:NP_001382391
Current member NCBI NM_001395462.2 NP_001382391.1 Accepted alive Link to Nucleotide Sequence:NM_001395462.2Link to Protein Sequence:NP_001382391.1Re-query CCDS DB by Nucleotide ID:NM_001395462Re-query CCDS DB by Protein ID:NP_001382391Link to BLAST:NP_001382391.1
Original member Current member NCBI NM_033631.5 NP_361013.3 Accepted alive Link to Nucleotide Sequence:NM_033631.5Link to Protein Sequence:NP_361013.3Re-query CCDS DB by Nucleotide ID:NM_033631Re-query CCDS DB by Protein ID:NP_361013Link to BLAST:NP_361013.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001136018.1 1076 Q86V48-1 1076 100% 0 0
NP_001382390.1 1076 Q86V48-1 1076 100% 0 0
NP_001382391.1 1076 Q86V48-1 1076 100% 0 0
NP_361013.3 1076 Q86V48-1 1076 100% 0 0

Chromosomal Locations for CCDS 30628.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 23088895 23089053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 23091190 23094261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3231 nt):
ATGGCCGAATTTACAAGCTACAAGGAGACGGCCTCCAGCCGCCACTTGCGGTTTAAGCTACAGAGTCTAA
GCCGCCGCCTTGATGAGTTGGAGGAAGCCACAAAAAACCTCCAGAAAGCAGAGGATGAACTCCTGGATCT
CCAGGACAAGGTGATTCAGGCAGAAGGTAGCAACTCCAGCATGTTGGCGGAGATTGAAGTGCTGCGCCAG
CGGGTGCTGAGAATTGAAGGCAAAGACGAGGAAATTAAGAGAGCAGAGGATCTGTGTCGTCTGATGAAGG
AGAAACTTGAAGAGGAAGAAAACCTCACCCGGGAGCTGAAATCTGAGATTGAGCGGCTTCAGAAACGAAT
GGCTGAATTAGAGAAGCTAGAAGAGGCCTTCAGCAGGAGTAAGAATGACTGTACCCAGCTGTGTCTGAGC
CTGAATGAGGAGAGAAATCTGACCAAGAAAATCTCCTCTGAGCTGGAAATGCTCAGAGTCAAAGTGAAAG
AACTAGAATCTTCTGAGGACCGCCTGGATAAAACTGAGCAGAGTTTAGCGTCAGAGTTAGAAAAGCTGAA
ATCATTAACTCTGAGCTTTGTAAGTGAGAGAAAATACTTGAATGAAAAGGAGAAAGAAAATGAGAAATTG
ATAAAAGAACTCACTCAAAAACTAGAGCAGAACAAAAAAATGAACCGAGATTATACAAGGAATGCTTCTA
ATCTGGAAAGAAATGACCTACGGATTGAGGATGGCATCTCTTCCACACTGCCGTCCAAAGAATCAAGAAG
GAAGGGTGGTCTGGACTACCTAAAGCAGGTAGAGAATGAAACAAGAAACAAATCAGAAAATGAAAAGAAC
CGCAATCAGGAAGACAACAAAGTCAAAGACCTTAACCAAGAGATTGAGAAACTTAAGACACAAATCAAAC
ACTTTGAATCGTTGGAAGAAGAGCTTAAGAAAATGAAGTCCAAAAATAACGACCTTCAGGATAATTACCT
AAGTGAACAAAATAAAAACAAATTATTAGCCAGCCAACTGGAGGAGATAAAGCTACAAATCAAGAAACAG
AAAGAGTTAGAAAATGGAGAGGTAGAAGGGGAAGATGCTTTCCTGTCCAGCAAAGGCAGACATGAGAGGA
CTAAGTTTAGAGGCCACGGAAGTGAAGCTTCTGTGTCCAAGCACACAGCGCGGGAACTGTCTCCTCAGCA
TAAGCGGGAACGACTCCGGAACAGGGAGTTTGCTCTCAACAATGAAAACTATTCTCTGAGCAACAGGCAG
GTTTCTTCTCCCAGTTTCACCAACAGGAGGGCAGCAAAAGCTTCTCACATGGGGGTGAGTACAGACAGTG
GGACTCAGGAGACAAAGAAAACTGAAGACCGGTTTGTACCCGGCTCCTCCCAGAGCGAAGGGAAGAAGTC
TAGGGAGCAGCCCTCAGTGCTGAGTCGCTACCCCCCGGCTGCTCAGGAGCACAGTAAAGCGTGGAAGGGG
ACTTCCAAGCCAGGCACCGAGAGCGGACTGAAGGGAAAAGTGGAGAAGACAACACGAACGTTTAGTGACA
CCACCCATGGATCTGTTCCCAGTGACCCATTGGGTAGAGCTGACAAGGCTTCTGACACCTCCTCTGAGAC
TGTCTTTGGCAAGAGGGGACACGTGCTTGGCAACGGAAGTCAAGTAACTCAGGCTGCAAACTCTGGCTGT
TCTAAGGCCATTGGAGCCCTGGCCTCATCTCGAAGATCCTCCTCAGAAGGGCTCTCTAAAGGCAAAAAGG
CTGCCAATGGCCTTGAGGCTGATAACAGTTGCCCGAATTCCAAGGCTCCTGTTCTATCGAAGTATCCTTA
TAGCTGTAGAAGCCAAGAGAACATCCTTCAGGGATTTTCAACCTCACATAAAGAAGGGGTTAATCAACCT
GCAGCAGTTGTGATGGAAGACAGCAGTCCGCATGAAGCCTTGAGGTGTCGAGTCATCAAATCCAGTGGCA
GAGAGAAGCCAGACTCAGATGATGACTTGGACATAGCATCTCTTGTTACTGCCAAGTTGGTAAATACAAC
CATCACTCCAGAGCCAGAGCCCAAACCACAGCCTAACTCTAGAGAAAAGGCTAAAACCCGAGGGGCACCT
AGAACCTCCCTATTTGAGAATGATAAAGATGCTGGAATGGAGAATGAATCTGTGAAATCTGTCAGAGCCT
CCACCAATACCATGGAGCTCCCAGATACCAATGGTGCTGGGGTAAAAAGCCAAAGGCCCTTTAGCCCCAG
AGAGGCGTTGCGGTCTAGAGCCATCATCAAACCTGTTATTGTTGATAAGGATGTGAAAAAAATCATGGGA
GGATCTGGAACAGAGACTACGTTGGAGAAACAGAAACCCGTCTCCAAACCAGGGCCAAACAAAGTGACAA
GTAGCATTACTATATATCCATCTGACAGCAGCAGCCCCAGAGCTGCTCCGGGTGAGGCCCTGAGGGAGAG
GCACACATCCACTAGCAATATCCAGGTGGGGCTGGCAGAGCTCACATCAGTTAGCAACCATGTCAGCTCC
CCTTTTGAGCTCTCCATTCACAAACATGACATCACCCTGCAGCTTGCAGAAGCGGAGAGAATGGCAGATG
GGCCCCTGAAGGACAGGCCAGAAACAGTGGTCTCTCGGAGCAGCATTATAATCAAGCCATCGGATCCTGT
GGAGAGGAATAGCCATGCACCTCCAGCGGAGACAATCAGGTGGAAAAGCCATAGTGCCCCTTCAGAAGTG
GGCTTCTCAGATGCCAGACATGTTACTGTGCGGAATGCCTGGAAGAGTAGGCGAGACTTGAAATCTTTAG
AAGACCCCCCAACTCGAATAGGTAAAAACGTGGAATCTACCAATAGCAATGCCTACACCCAGAGGTCTTC
CACAGACTTCTCAGAACTCGAACAGCCCAGGTCCTGCCTTTTTGAGCAGGGCACTCGAAGGGTAGGACCA
AGTTCAGGGGATGCCCCTGAGCCCTCCTCCAGAAGGACCCAAAGTAGCCTCACTGTGTCAGAGGTGCTTA
CCCGTCGGAATCGGGTAGGAGACACCATCACTGTCGCAGCCTGGAACCACTCAGCAAGCATGGAGGAAGA
AGGGGAAGACTGTACACTCAGTGTCTACAGGCAACTGCACAACTCCCTGGATCCGTCTGAACTGCCTGGG
AAGCAGGGGCTGCCAGAGTCTGGGCGAGTACGGGCCGAGGAACGATTACGGCCAACCAGGCCCTGTGCTG
AGGAGAACTGA

Translation (1076 aa):
MAEFTSYKETASSRHLRFKLQSLSRRLDELEEATKNLQKAEDELLDLQDKVIQAEGSNSSMLAEIEVLRQ
RVLRIEGKDEEIKRAEDLCRLMKEKLEEEENLTRELKSEIERLQKRMAELEKLEEAFSRSKNDCTQLCLS
LNEERNLTKKISSELEMLRVKVKELESSEDRLDKTEQSLASELEKLKSLTLSFVSERKYLNEKEKENEKL
IKELTQKLEQNKKMNRDYTRNASNLERNDLRIEDGISSTLPSKESRRKGGLDYLKQVENETRNKSENEKN
RNQEDNKVKDLNQEIEKLKTQIKHFESLEEELKKMKSKNNDLQDNYLSEQNKNKLLASQLEEIKLQIKKQ
KELENGEVEGEDAFLSSKGRHERTKFRGHGSEASVSKHTARELSPQHKRERLRNREFALNNENYSLSNRQ
VSSPSFTNRRAAKASHMGVSTDSGTQETKKTEDRFVPGSSQSEGKKSREQPSVLSRYPPAAQEHSKAWKG
TSKPGTESGLKGKVEKTTRTFSDTTHGSVPSDPLGRADKASDTSSETVFGKRGHVLGNGSQVTQAANSGC
SKAIGALASSRRSSSEGLSKGKKAANGLEADNSCPNSKAPVLSKYPYSCRSQENILQGFSTSHKEGVNQP
AAVVMEDSSPHEALRCRVIKSSGREKPDSDDDLDIASLVTAKLVNTTITPEPEPKPQPNSREKAKTRGAP
RTSLFENDKDAGMENESVKSVRASTNTMELPDTNGAGVKSQRPFSPREALRSRAIIKPVIVDKDVKKIMG
GSGTETTLEKQKPVSKPGPNKVTSSITIYPSDSSSPRAAPGEALRERHTSTSNIQVGLAELTSVSNHVSS
PFELSIHKHDITLQLAEAERMADGPLKDRPETVVSRSSIIIKPSDPVERNSHAPPAETIRWKSHSAPSEV
GFSDARHVTVRNAWKSRRDLKSLEDPPTRIGKNVESTNSNAYTQRSSTDFSELEQPRSCLFEQGTRRVGP
SSGDAPEPSSRRTQSSLTVSEVLTRRNRVGDTITVAAWNHSASMEEEGEDCTLSVYRQLHNSLDPSELPG
KQGLPESGRVRAEERLRPTRPCAEEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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