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Report for CCDS37666.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37666.1 Public Mus musculus 17 Acsbg3 23 108 98 CCDS HistoryNCBI Gene:78625Re-query CCDS DB by CCDS ID:37666.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37666.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025048.6 ENSMUSP00000025048.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025048.6Link to Ensembl Protein Viewer:ENSMUSP00000025048.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000025048Re-query CCDS DB by Protein ID:ENSMUSP00000025048
Original member Current member NCBI NM_030141.2 NP_084417.1 Accepted alive Link to Nucleotide Sequence:NM_030141.2Link to Protein Sequence:NP_084417.1Re-query CCDS DB by Nucleotide ID:NM_030141Re-query CCDS DB by Protein ID:NP_084417Link to BLAST:NP_084417.1

Chromosomal Locations for CCDS 37666.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 56876261 56876396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56877363 56877589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56880451 56880539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56880946 56881066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56882167 56882247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56882541 56882690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56882780 56882986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56883316 56883497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56883627 56883860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56884751 56884968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56885084 56885223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56886441 56886687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56888637 56888722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2118 nt):
ATGACTGACCCTAAGGAATCAGATAACCTTCAGACCTCCAGGAGGATCCTGAAAACCAAAACCATCTTGA
AGAACAAAATTCACAGTGCAATATCGAAGAAGGCACAAGCAGATAACTTTGAGATACTGACCCCAGGTTC
CAGCTACTGGACATCTAAGCGAGAAGGCCAGGTGCAGCTGCGCATGGGCAAGGACCCACTAGATAACGAG
CCTCCGGTCACAGTTCCCGACTTGATCATGAGCGCGGCCACTAAGTACTCACACTACCTGGCGATCGGTT
CCAAGTACAAGAAAAGCTGGCAACTGCTCACCTACATCGAGTACTACGAGGCCTGCCGGCGTGCTGCCAA
GGCCTTCCTCAAGGTGGGTCTGGAACGCTTTCATGGTGTGGGTATCATGGGCATCAATTCCTCGGAGTGG
GTGATTGCCAGCATTGGAGCTATCATGGCAGGTGGCATCTCTGTGGGCATCTTGAGCAGCATCTCCCCCA
AAGCCTGCCAAGTCATCGCTGAGACCTCAGAAATGGATATCTTTGTGGTGGATAATGACAGACAGCTGCA
AAAGATTAACCAGATCCAGGGCTACTTGAAGCATCTCAAGGCCATCATACAGTACAGAGAAGATATCCAG
GAAGCGCAGCCAAATCTATACTCGTGGAAAGGCTTCCTGGACCTCGCGGATGGCATCTCGGATGAAAAAC
TGGACAAAATCATCGACACACTGAAGCCCAATCAGTGCTGTGCTTTGGTATATAACCAGGGTACCACAGG
GCCCTCGAAGGCCATAATGCTGAGCCATGACAACATCACATGGACCACAGCAGCCATCGTTCAAAGCCTT
GGGTTCAAGTGTCCACCTCAGGGTCAGGAGATCCTCGTGAGCTACCTGCCACTTTGCTTCCCTGGAATAC
AGATCTTGGACGTTTGGGTGGCCATTTCCGTGGCTGGGACAGTCTATTTCCCCTCGCTAGACTCAGGGAA
GTGGAGTGGGCTGCCACGAACCCCTGGCACGGGCTTCCTGATGGAGCTGCTCCGCGAGGTCCAGCCCACC
ACGTTCTGCGGCATTCCGTGGGTGTGGGACCGCATGCTGGACAGTCTGAAGACCAAATTCCTGGACTCCA
CCGCCTTCCGCAGGAGGATCGACCATTGGGCCATGCGCATGGGCCTCCACACCAACAAGAAGCTGATGAT
GGGGGAGATCCACCAGCCGCTGTGCTTCGGCCTGGCCAAGAGATTGACCTTCGAGCGCGCCAGGAAGTTC
CTGGGTCTCAACCATTGCCAGCAGTTTCTAAACATGGGCATGGGGCTGCCGAGTGGCACGCTGGATTTCT
TCCTCAGCGTAAACATCCCTATCATGGAGTTGTACGGCTTGTCGGAGTGCACGGGACTACACACAGTGTC
CAACCTGCAGGCTTACCGGATACTGAGCGCTGGGAAAGCGCTTCCCAAAACCCACACAAAGGTGGAAAAA
GAAAACAAGGATGGGATCGGGAACTTGTGTATCTGGGGCCGCCACATATTCATGGGGTACCTCAGAGACA
AGCAGAGCACAGAGAGGAAGGTGGACACCCACGGCTGGCTACACACGAACGACTTGGGCTTCTTGGATTT
TGACAAGTTCCTCTATGTCATGGGGAACAATAACGATTTGATCAAGCTGAGCTCGGGGGAAATGGTCAAC
CCGTATCCCATCGAGGAGCGGGTAAGGACGCGAATCCCCATCGTCCGCTATGCCATGCTGGTGGGCCAGG
ACGCCCCGTACCTGTGCGCCCTCCTCACATTGAAGTGTCAGATAAATCCAGAGACTGGAGAGGCTCGGAG
TAACCTGACCAGTGAGGTCGTCGCTTGCTGTCGGAAGCTTCGAAGCCAGTCGACCTGGTTGTCAGACGTC
CTATATGACCGTGACCCTTTGGTCACGGAGTTCATTAACCAGGGCATCGAGGATGTGAATTCGGAGGCGC
CCACAATGGGTGCCAAGATCATTAAGTGGGTCATTCTAGACAACGATTTCTCTGTGGATGGTGGGGAGCT
TGGACCCATGAGCAAGATGAACAGGTCCATTGTGGTCAAGATATACCAAGAGGAAATCCAGAAACTCTAT
GAGACTTCGACCTCCTAG

Translation (705 aa):
MTDPKESDNLQTSRRILKTKTILKNKIHSAISKKAQADNFEILTPGSSYWTSKREGQVQLRMGKDPLDNE
PPVTVPDLIMSAATKYSHYLAIGSKYKKSWQLLTYIEYYEACRRAAKAFLKVGLERFHGVGIMGINSSEW
VIASIGAIMAGGISVGILSSISPKACQVIAETSEMDIFVVDNDRQLQKINQIQGYLKHLKAIIQYREDIQ
EAQPNLYSWKGFLDLADGISDEKLDKIIDTLKPNQCCALVYNQGTTGPSKAIMLSHDNITWTTAAIVQSL
GFKCPPQGQEILVSYLPLCFPGIQILDVWVAISVAGTVYFPSLDSGKWSGLPRTPGTGFLMELLREVQPT
TFCGIPWVWDRMLDSLKTKFLDSTAFRRRIDHWAMRMGLHTNKKLMMGEIHQPLCFGLAKRLTFERARKF
LGLNHCQQFLNMGMGLPSGTLDFFLSVNIPIMELYGLSECTGLHTVSNLQAYRILSAGKALPKTHTKVEK
ENKDGIGNLCIWGRHIFMGYLRDKQSTERKVDTHGWLHTNDLGFLDFDKFLYVMGNNNDLIKLSSGEMVN
PYPIEERVRTRIPIVRYAMLVGQDAPYLCALLTLKCQINPETGEARSNLTSEVVACCRKLRSQSTWLSDV
LYDRDPLVTEFINQGIEDVNSEAPTMGAKIIKWVILDNDFSVDGGELGPMSKMNRSIVVKIYQEEIQKLY
ETSTS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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