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Report for CCDS34161.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34161.1 Public Homo sapiens 5 ANKRD55 24 110 108 CCDS HistoryNCBI Gene:79722Re-query CCDS DB by CCDS ID:34161.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34161.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341048.9 ENSP00000342295.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000341048.9Link to Ensembl Protein Viewer:ENSP00000342295.4Re-query CCDS DB by Nucleotide ID:ENST00000341048Re-query CCDS DB by Protein ID:ENSP00000342295
Original member Current member NCBI NM_024669.3 NP_078945.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024669.3Link to Protein Sequence:NP_078945.2Re-query CCDS DB by Nucleotide ID:NM_024669Re-query CCDS DB by Protein ID:NP_078945Link to BLAST:NP_078945.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078945.2 614 Q3KP44-1 614 100% 0 0

Chromosomal Locations for CCDS 34161.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 56100183 56100304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 56102494 56102586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 56111118 56111782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 56116615 56116782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 56126922 56127106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 56143801 56143929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 56159833 56159893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 56170694 56170803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 56176152 56176282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 56183512 56183634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 56232856 56232913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1845 nt):
ATGATGAGACAGGCTACCATGGATTTCAGCACCCCTTCTGTGTTTGATCAGCAAAGAGGTGACTCATCTG
AGGAAGTTGACCTGACCATGGTTTATCAAGCAGCCTCTAATGGAGATGTCAATGCTCTGACTGCAGTGAT
TCGGGAAGACCCTTCTATCCTAGAATGCTGTGACAGTGAAGGATGCACGCCCTTGATGCATGCGGTTTCT
GGACGTCAAGCGGACACAGTGAAGCTGCTGTTGAAGATGGGAGCCAATATTAACATGCAGGATGCTTATG
GCCGCACAAGTTTATGCCTGGCCACCTACCTGGGCTGGCTTGAAGGCTGTGTGAGTCTACTCAGAAACGG
TGCCAAGCACAATATCCCAGATAAAAATGGCCGCCTGCCACTGCATGCTGCCACTGCTGAGCCCGATATG
AGGCTCCTCACGGTCCTGTTGCAACAGTCGAACATCAGCGAGATTAATCACCAGGACAATGAGGGAATGA
CACCACTCCACTGGGCGGCTTTCCACAACCAGCCTCAACACACACAAATGCTGCTGAAGAAGGGGGCAGA
CCCCACCCTTGTGGATAAAGACTTTAAAACCGCTCTCCACTGGGCAGTCCAGAGTGGAAATAGGATTCTG
TGCTCCATCATTCTGAGCCATCACCAGGGGCCGTCCATAATCAACTATGATGATGAGAGTGGGAAGACAT
GTGTACATATCGCAGCGGCAGCGGGCTTCAGCGATATTATTCATGAGCTGGCAAGAGTCCCTGAGTGTAA
CCTGCAGGCTCTGGATGTGGATGACAGGACACCTCTGCACTGGGCTGCAGCTGCAGGGAAGGCCGAATGT
GTCCAGTCACTGCTGGAGTTGGGAATGGACAGCAACCTGCGGGACATCAATGAGAGCACGCCCTTGGCCT
ATGCCCTGTACTGCGGTCACACGGCGTGTGTCAAACTCCTCTCCCAAGAGAGCAGAACAGAGCCTACTCG
ACCCCCTCCCTCCCAGAGCAGTCGGCCCCAGAAGAAGGAGAGACGGTTCAACGTGCTCAACCAAATATTC
TGCAAAAACAAGAAAGAAGAGCAGAGAGCCCATCAGAAGGATCCCAGCAGGGACCGATACAGAGAGGAGG
ACACCTCAGAAGTCAATGACATCATCACCACCTTTGATAGCATCGTGGGTACCAACTGCCAAGAACAGCC
TGGTGATCAGGTGGCTATGGTTGAATTTAAGAAGAAAACCTCAGACAATTCAAAATATCTCTTACCAGAA
AAGAAACCGCTGGCCCGTAAGGGGCTTCCACCAATCAGAACGCAGAGTCTCCCACCCATCACCCTGGGCA
ATAACTTCCTAACAGCCTCCCATAGGGCCACTTCCCATGCAGGCCTGAGCTCTGCTCCTCATCATATGGC
CCAGCGATCTCAGAAAAGTCGAAGTGAGCAGGATTTATTAAATAACAGAACTGGCTGCCAGATGTTACTA
GATAACCCCTGGAAGAGTGATTCTAATCAGGTATTTTCCTACAAAGTTTGGACTGTGTCTTCTTCTGATA
AGCTGCTGGACAGATTGCTCAGTGTCCGGCCTGGTCACCAAGAGGTCTCCGTGCCACCACACCTTCGCCA
TCTACATAATCCATCATCAGGACAAAATTTTCAGCATCTTTCCCCAAACAGACACAAAATCAGGGATCTT
CCTTTCACTCGGAACAACCTAGCTCCCCTACCAGATCAAAAATTTCTATCTGGAGAACCTCTGCGGACAA
ACCGAGTGCTTCCTGCAATTCCAAGTCAACGAAGACACAGCACAGCAGCAGAAGAGAGTGAACATTCTGC
CAACCCCACCAGTGATGAAAATTAA

Translation (614 aa):
MMRQATMDFSTPSVFDQQRGDSSEEVDLTMVYQAASNGDVNALTAVIREDPSILECCDSEGCTPLMHAVS
GRQADTVKLLLKMGANINMQDAYGRTSLCLATYLGWLEGCVSLLRNGAKHNIPDKNGRLPLHAATAEPDM
RLLTVLLQQSNISEINHQDNEGMTPLHWAAFHNQPQHTQMLLKKGADPTLVDKDFKTALHWAVQSGNRIL
CSIILSHHQGPSIINYDDESGKTCVHIAAAAGFSDIIHELARVPECNLQALDVDDRTPLHWAAAAGKAEC
VQSLLELGMDSNLRDINESTPLAYALYCGHTACVKLLSQESRTEPTRPPPSQSSRPQKKERRFNVLNQIF
CKNKKEEQRAHQKDPSRDRYREEDTSEVNDIITTFDSIVGTNCQEQPGDQVAMVEFKKKTSDNSKYLLPE
KKPLARKGLPPIRTQSLPPITLGNNFLTASHRATSHAGLSSAPHHMAQRSQKSRSEQDLLNNRTGCQMLL
DNPWKSDSNQVFSYKVWTVSSSDKLLDRLLSVRPGHQEVSVPPHLRHLHNPSSGQNFQHLSPNRHKIRDL
PFTRNNLAPLPDQKFLSGEPLRTNRVLPAIPSQRRHSTAAEESEHSANPTSDEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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