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Report for CCDS44756.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44756.1 Public Homo sapiens 11 CCDC15 24 110 108 CCDS HistoryNCBI Gene:80071Re-query CCDS DB by CCDS ID:44756.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44756.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344762.6 ENSP00000341684.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000344762.6Link to Ensembl Protein Viewer:ENSP00000341684.5Re-query CCDS DB by Nucleotide ID:ENST00000344762Re-query CCDS DB by Protein ID:ENSP00000341684
Original member Current member NCBI NM_025004.3 NP_079280.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_025004.3Link to Protein Sequence:NP_079280.2Re-query CCDS DB by Nucleotide ID:NM_025004Re-query CCDS DB by Protein ID:NP_079280Link to BLAST:NP_079280.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079280.2 951 Q0P6D6 951 100% 0 0

Chromosomal Locations for CCDS 44756.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 124954733 124954909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124959115 124959264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124959815 124960003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124975096 124975209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124977478 124977600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124986742 124986888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124987127 124988134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124991461 124991583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124992580 124992687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 124993169 124993243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125003867 125003959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125005109 125005212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125038431 125038604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125038921 125039069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125040590 125040711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2856 nt):
ATGCTGGGAAGTATGGCCCGAAAGAAACCTCGAAATACCTCAAGGTTGCCCCTGGCTTTAAACCCCCTGA
AGAGCAAGGACGTGTTGGCAGTGCTGGCTGAGAGGAACGAGGCTATAGTACCAGTTGGGGCATGGGTGGA
ACCTGCCTCACCAGGTAGTTCGGAAATCCCAGCATATACATCAGCATATTTAATTGAAGAAGAACTAAAG
GAACAGCTAAGAAAAAAACAAGAAGCTTTGAAACATTTTCAGAAACAAGTTAAATACCGAGTAAATCAAC
AAATTAGGTTGAGAAAAAAGCAACAGCTTCAGAAGTCTTATGAAAGAGCACAAAAAGAAGGCTCCATAGC
CATGCAGTCTTCAGCAACACACTTAACTTCCAAAAGGACAAGTGTTTTTCCAAACAATTTGAATGTTGCT
ATTGGAAGTTCTAGGTTACCTCCTTCCCTGATGCCTGGGGATGGAATAGAGGATGAAGAGAATCAGAACG
AATTATTCCAACAACAAGCCCAGGCTCTTAGTGAAACTATGAAACAGGCACGTCACCGGCTAGCATCCTT
TAAAACCGTGATTAAAAAAAAGGGATCAGTGTTTCCAGATGATGGAAGGAAAAGCTTTCTTACCAGAGAG
GAAGTGCTTTCCAGGAAACCAGCATCCACTGGGATAAATACAGGAATAAGAGGAGAGTTGCCCATTAAGG
TCCATCAAGGTCTTTTAGCTGCTGTACCTTACCAGAATTATATGGAAAATCAGGAACTTGACTATGAGGA
ACCTGACTATGAGGAATCTTCATCTCTTGTAACTGATGAGAAAGGGAAAGAAGATTTGTTTGGGAGAGGC
CAGCAGGACCAGCAGGCTATCCATTCTGAAGATAAGAACAAACCTTTCAGCAGAGTTCAGAAAGTAAAAT
TCAAAAATCCATTATTTGTTCTGATGGAAGAGGAAGAACAAAAGCAGTTACATTTTGAGGGCCTTCAGGA
TATTCTGCCAGAAGCCCAGGATTATTTTCTAGAAGCCCAAGGTGATTTGCTGGAAACCCAGGGTGATTTG
ACAGGAATCCAGAGTGTTAAGCCAGATACCCAGGCTGTTGAAATGAAGGTTCAGGTTACTGAGCCAGAAG
GCCAGGCCATTGAGCCAGAAGGCCAGCCTATTAAGACAGAAACTCAGGGTATTATGCTGAAAGCCCAGAG
TATTGAGCTAGAAGAAGGGAGTATTGTGTTGAAAACCCAGGATTTTCTACCCACAAATCAGGCTCTTCTA
ACGAAAAACCAGGATGTTTTACTCAAAGACCACTGTGTTCTCCCTAAAGACCAGAGTATTCTACTCAAAT
ATCAGGACCAGGACTTCCTACCCAGAGACCAGCATGTTCTCCACAAAGACCAAGATATTCTGCCAAAATA
TCAGGACCAGAATTTTCTACCTAAGGACCAGAATTTTTTATCTAGAGACCAGCATGTTCTCCCCAAAGAC
CAAGATATTCTGCCAAAATATCAGGACCAGAATTTTCTACCTAAGGACCAGAATTTTTTGTCTAGAGACC
AGCATGTTCTCCCCAAAGACCAGAATATTCTACCTAAATATCAAGGCCAGGATTTTCTACCTAAAGACCA
GGACTTTTTATCTAGAGACCAGCATGTTCTCCCCAAAGACTGGAATATTCTACCCAAATGTCAGGACCAG
GATTTTCTACCCAGAGACCAAGGTGTTCTTCCCAAAGACCAAAATATTCTACCCATATGTCAGGACCAGG
ATTTTCTACCCAGAGACCAAGGTTATCTTCCTAAAGACCAAAATATTCTACCCATATGTCAGGACCGGGA
TTTTCTACCCAGAGACCTGCATGTTCTCTCCAACGACCAGAATATTCTACCCAAATGTCAGGACCAAGAT
TTTCTACCAAAATATCAGAAAGTACACTTTAAGGAGCCATACTCTGATATGACAGATGAGAAAGGGAGAG
AAGACTTTTCTCTGGCAGACTATCAGTGTTTGCCTCCCAAATCCCAGGACCAGGATGACATCAAAAATCA
GCAACCTGCATCTTTTATGAGAGAAGAAAGAGTGAGAGAAGAATTGCCTCTGGACTATCATCAATATGTT
GTACCTAAAATCCAGGACCAAGACTCCCCTAGAGAACAGAACAAGCATATCAAACTACCCTCATCTTTTG
AGAAATGGGAGATTGCAAGAGGAAATACTCCTGGAGTGCCCTTGGCTTATGATAGGTATCAATCAGGATT
GAGCACTGAATTCCAAGCTCCACTGGCATTTCAGTCTGACGTGGATAAAGAAGAAGATAAGAAAGAGCGT
CAAAAGCAGTACCTGAGACATAGACGACTTTTCATGGATATTGAGAGAGAACAAGTTAAAGAACAACAAA
GGCAAAAAGAACAAAAGAAGAAAATTGAAAAAATTAAGAAAAAGAGAGAGCAAGAATGTTATGCTGCAGA
GCAGAGGATCCTAAGAATGAACTTTCATGAAGATCCATATTCAGGAGAGAAGTTGAGTGAGATATTAGCC
CAGTTACAACTTCAAGAAATAAAAGGAACCAGAGAAAAACAACAGAGAGAAAAAGAATACCTGAGATATG
TAGAAGCTTTACGAGCCCAAATCCAGGAGAAAATGCAGCTGTATAATATTACTTTACCTCCACTATGCTG
TTGTGGTCCTGATTTTTGGGATGCTCATCCTGATACCTGTGCCAACAACTGTATTTTCTATAAAAACCAC
AGAGCATATACTCGGGCACTACATTCATTCATCAATTCCTGTGATGTCCCTGGGGGTAATTCAACTCTTC
GAGTCGCAATTCATAATTTTGCTTCTGCACACAGGCGGACTTTGAAAAATCTATAA

Translation (951 aa):
MLGSMARKKPRNTSRLPLALNPLKSKDVLAVLAERNEAIVPVGAWVEPASPGSSEIPAYTSAYLIEEELK
EQLRKKQEALKHFQKQVKYRVNQQIRLRKKQQLQKSYERAQKEGSIAMQSSATHLTSKRTSVFPNNLNVA
IGSSRLPPSLMPGDGIEDEENQNELFQQQAQALSETMKQARHRLASFKTVIKKKGSVFPDDGRKSFLTRE
EVLSRKPASTGINTGIRGELPIKVHQGLLAAVPYQNYMENQELDYEEPDYEESSSLVTDEKGKEDLFGRG
QQDQQAIHSEDKNKPFSRVQKVKFKNPLFVLMEEEEQKQLHFEGLQDILPEAQDYFLEAQGDLLETQGDL
TGIQSVKPDTQAVEMKVQVTEPEGQAIEPEGQPIKTETQGIMLKAQSIELEEGSIVLKTQDFLPTNQALL
TKNQDVLLKDHCVLPKDQSILLKYQDQDFLPRDQHVLHKDQDILPKYQDQNFLPKDQNFLSRDQHVLPKD
QDILPKYQDQNFLPKDQNFLSRDQHVLPKDQNILPKYQGQDFLPKDQDFLSRDQHVLPKDWNILPKCQDQ
DFLPRDQGVLPKDQNILPICQDQDFLPRDQGYLPKDQNILPICQDRDFLPRDLHVLSNDQNILPKCQDQD
FLPKYQKVHFKEPYSDMTDEKGREDFSLADYQCLPPKSQDQDDIKNQQPASFMREERVREELPLDYHQYV
VPKIQDQDSPREQNKHIKLPSSFEKWEIARGNTPGVPLAYDRYQSGLSTEFQAPLAFQSDVDKEEDKKER
QKQYLRHRRLFMDIEREQVKEQQRQKEQKKKIEKIKKKREQECYAAEQRILRMNFHEDPYSGEKLSEILA
QLQLQEIKGTREKQQREKEYLRYVEALRAQIQEKMQLYNITLPPLCCCGPDFWDAHPDTCANNCIFYKNH
RAYTRALHSFINSCDVPGGNSTLRVAIHNFASAHRRTLKNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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