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Report for CCDS12847.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12847.1 Public Homo sapiens 19 ZNF614 24 110 108 CCDS HistoryNCBI Gene:80110Re-query CCDS DB by CCDS ID:12847.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12847.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000270649.11 ENSP00000270649.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000270649.11Link to Ensembl Protein Viewer:ENSP00000270649.5Re-query CCDS DB by Nucleotide ID:ENST00000270649Re-query CCDS DB by Protein ID:ENSP00000270649
Original member Current member NCBI NM_025040.4 NP_079316.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_025040.4Link to Protein Sequence:NP_079316.2Re-query CCDS DB by Nucleotide ID:NM_025040Re-query CCDS DB by Protein ID:NP_079316Link to BLAST:NP_079316.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079316.2 585 Q8N883-1 585 100% 0 0

Chromosomal Locations for CCDS 12847.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 52015840 52017359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52018008 52018103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52018368 52018494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52025731 52025745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1758 nt):
ATGATCAAGACCCAGGAATCACTGACCCTGGAGGATGTGGCTGTGGAATTCAGCTGGGAGGAGTGGCAGC
TCCTGGACACTGCTCAGAAGAACCTGTACCGGGATGTGATGGTGGAGAACTATAACCACCTAGTATCACT
GGGGTATCAAACTAGCAAACCAGATGTACTCTCCAAGTTGGCACATGGACAAGAACCATGGACAACAGAT
GCTAAAATTCAGAATAAAAATTGTCCAGGAATCGGGAAAGTTGACAGTCATCTGCAAGAGCACTCTCCAA
ACCAAAGACTTCTGAAGAGCGTGCAGCAATGCAATGGACAGAATACACTTAGAAATATTGTACATCTCAG
CAAGACACATTTTCCTATAGTGCAAAATCATGATACATTTGACTTGTACAGAAAAAATTTGAAATCAAGT
TTAAGTTTAATCAACCAGAAGAGAAGACATGGAATAAATAACCCTGTTGAGTTTATTGGAGGTGAGAAAA
CACTTCTACATGGTAAGCATGAACGTACGCATACTAAAACTAGATTTTCTGAAAATGCAAAATGTATCCA
TACTAAATTCCAAGTCTTCAAGCATCAGAGGACTCAGAAAATTGAGAAACCCCATGCATGCATTGAATGT
GAGCAAACCTTCCTTAGGAAGTCTCAGCTCATTTACCATGAGAACATTTGTATACAAGAGAATCCTGGAA
GTGGTCAATGTGAGAAATTATCCAGAAGTGTCCTGTTCACTAAGCATCTGAAAACTAATACAACAGACAA
AATCTGTATACCCAATGAATATAGAAAAGGCTCTACTGTGAAGAGTAGTCTCATTACACATCAACAAACC
CATACAGAAGAGAAATCCTATATGTGCAGTGAGTGTGGAAAGGGCTTTACAATGAAGCGCTATCTAATTG
CTCATCAGCGAACTCATAGTGGAGAGAAACCTTATGTGTGCAAAGAATGTGGAAAAGGTTTCACTGTGAA
GAGCAATCTCATTGTACATCAGCGAACTCATACAGGGGAGAAACCCTATATATGCAGTGAATGTGGAAAA
GGCTTCACCATGAAGCGCTATCTTGTTGTACATCAGCGAACTCATACTGGAGAGAAACCCTATATGTGCA
GTGAATGTGGAAAAGGCTTTACCGTGAAGAGCAATCTCATTGTACATCAGCGCTCCCACACAGGAGAAAA
ATCTTACATATGCAGCGAATGTGGAAAAGGCTTCACTGTCAAACGCACTCTCGTTATACATCAGCGAACT
CATACAGGAGAGAAATCTTACATATGCAATGAATGTGGTAAAGGCTTCACCACAAAGCGCACTCTTATTA
TACATCAGCGAACTCATACAGGAGAAAAACCCTATGAATGCAATGAATGTGGTAAAGCCTTCAGCCAGAA
AATATGCCTCATACAACATGAGAGATGTCATACAGGAAAGACTCCCTTTGTATGTACCGAGTGCGGAAAA
TCCTATTCACACAAATATGGCCTCATTACCCATCAGAGAATTCACACAGGAGAGAAACCTTATGAGTGCA
ATGAATGTGGAAAAGCCTTCACCACAAAGTCAGTACTCAATGTACATCAAAGAACGCATACAGGAGAGAG
GCCGTATGGATGCAGTGATTGTGAGAAAGCCTTCTCCCACTTATCAAACCTTGTCAAACATAAGAAAATG
CACACAAGAGAAATGGGTAGAATCAGTCAAGTTGAAAACTCCTGTAATGGAGAGTCACAGCTCCTTCCTT
ATAAGTGA

Translation (585 aa):
MIKTQESLTLEDVAVEFSWEEWQLLDTAQKNLYRDVMVENYNHLVSLGYQTSKPDVLSKLAHGQEPWTTD
AKIQNKNCPGIGKVDSHLQEHSPNQRLLKSVQQCNGQNTLRNIVHLSKTHFPIVQNHDTFDLYRKNLKSS
LSLINQKRRHGINNPVEFIGGEKTLLHGKHERTHTKTRFSENAKCIHTKFQVFKHQRTQKIEKPHACIEC
EQTFLRKSQLIYHENICIQENPGSGQCEKLSRSVLFTKHLKTNTTDKICIPNEYRKGSTVKSSLITHQQT
HTEEKSYMCSECGKGFTMKRYLIAHQRTHSGEKPYVCKECGKGFTVKSNLIVHQRTHTGEKPYICSECGK
GFTMKRYLVVHQRTHTGEKPYMCSECGKGFTVKSNLIVHQRSHTGEKSYICSECGKGFTVKRTLVIHQRT
HTGEKSYICNECGKGFTTKRTLIIHQRTHTGEKPYECNECGKAFSQKICLIQHERCHTGKTPFVCTECGK
SYSHKYGLITHQRIHTGEKPYECNECGKAFTTKSVLNVHQRTHTGERPYGCSDCEKAFSHLSNLVKHKKM
HTREMGRISQVENSCNGESQLLPYK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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