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Report for CCDS10006.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
10006.1 |
Public |
Homo sapiens |
14 |
TMEM121 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:80757](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:10006.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 14 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 10006.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000392519.7 |
ENSP00000376304.2 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000392519.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000376304.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000392519](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000376304](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000431372.1 |
ENSP00000407456.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000431372.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000407456.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000431372](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000407456](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001331238.2 |
NP_001318167.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001331238.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001318167.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001331238](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001318167](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001318167.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_025268.4 |
NP_079544.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_025268.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_079544.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_025268](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_079544](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_079544.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 10006.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (960 nt): ATGGTGCTGCCGCCCCCGGACCGGCGCCACGTGTGCCTGACCACGCTGGTGATCATGGGCAGCATGGCCG TCATGGACGCGTACCTGGTGGAGCAGAACCAGGGCCCGCGCAAGATCGGCGTGTGCATCATCGTGCTGGT GGGCGACGTGTGCTTCCTGCTGGTGCTGCGCTACGTGGCCGTGTGGGTGGGCGCCGAGGTGCGCACGGCC AAGCGCGGCTACGCCATGATCCTGTGGTTCCTTTACATCTTCGTGCTGGAGATCAAGCTCTACTTCATCT TCCAGAACTACAAGGCGGCGCGGCGCGGCGCGGCGGACCCCGTGGCGCGCAAGGCGCTGACGCTGCTGCT GTCTGTGTGTGTGCCCGGCCTGTTCCTGCTGCTCGTGGCGCTGGACCGCATGGAGTACGTGCGCACCTTC CGCAAGCGCGAGGACCTGCGCGGCCGCCTGTTTTGGGTGGCGCTGGACCTGCTGGACCTGCTGGACATGC AGGCCAGCCTGTGGGAGCCGCCGCGCTCCGGGCTGCCGCTGTGGGCCGAGGGCCTCACCTTCTTCTACTG CTACATGCTGCTGCTGGTGCTGCCGTGCGTGGCGCTCAGCGAGGTCAGCATGCAGGGCGAGCACATAGCG CCGCAGAAGATGATGCTGTACCCGGTGCTCAGCCTCGCCACCGTCAATGTGGTGGCCGTGCTGGCGCGCG CCGCCAACATGGCGCTGTTCCGGGACAGCCGTGTCTCGGCCATCTTCGTCGGCAAAAACGTGGTGGCGCT CGCCACCAAGGCCTGCACCTTCCTGGAGTACCGCCGCCAGGTGCGCGACTTCCCGCCGCCTGCGCTATCA CTGGAGCTGCAGCCGCCACCCCCGCAGCGCAACTCGGTGCCGCCGCCGCCGCCGCCGCTGCACGGCCCGC CTGGGCGCCCCCACATGTCCTCGCCCACGCGTGACCCCCTGGACACGTGA
Translation (319 aa): MVLPPPDRRHVCLTTLVIMGSMAVMDAYLVEQNQGPRKIGVCIIVLVGDVCFLLVLRYVAVWVGAEVRTA KRGYAMILWFLYIFVLEIKLYFIFQNYKAARRGAADPVARKALTLLLSVCVPGLFLLLVALDRMEYVRTF RKREDLRGRLFWVALDLLDLLDMQASLWEPPRSGLPLWAEGLTFFYCYMLLLVLPCVALSEVSMQGEHIA PQKMMLYPVLSLATVNVVAVLARAANMALFRDSRVSAIFVGKNVVALATKACTFLEYRRQVRDFPPPALS LELQPPPPQRNSVPPPPPPLHGPPGRPHMSSPTRDPLDT
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