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Report for CCDS9415.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9415.1 Public Homo sapiens 13 CDADC1 24 110 108 CCDS HistoryNCBI Gene:81602Re-query CCDS DB by CCDS ID:9415.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9415.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000251108.10 ENSP00000251108.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000251108.10Link to Ensembl Protein Viewer:ENSP00000251108.6Re-query CCDS DB by Nucleotide ID:ENST00000251108Re-query CCDS DB by Protein ID:ENSP00000251108
Original member Current member NCBI NM_030911.4 NP_112173.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030911.4Link to Protein Sequence:NP_112173.1Re-query CCDS DB by Nucleotide ID:NM_030911Re-query CCDS DB by Protein ID:NP_112173Link to BLAST:NP_112173.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_112173.1 514 Q9BWV3-1 514 100% 0 0

Chromosomal Locations for CCDS 9415.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 49248038 49248119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 49248871 49248965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 49255839 49255913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 49259346 49259523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 49267490 49268059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 49274291 49274340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 49278350 49278519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 49280509 49280698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 49286222 49286282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 49291684 49291757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1545 nt):
ATGAAAGAAGCTGGGCAGATGCAAAATCTGGAGAGCGCGAGGGCCGGGCGGTCAGTCAGCACCCAGACTG
GCAGCATGACCGGTCAGATACCAAGGCTTTCTAAAGTCAACCTTTTCACTCTGCTCAGCCTCTGGATGGA
GCTCTTTCCAGCAGAAGCCCAGCGGCAAAAATCTCAGAAAAATGAAGAGGGAAAGCATGGACCCTTAGGA
GATAATGAAGAGAGGACCAGAGTATCTACTGACAAAAGACAGGTAAAGAGAACTGGTCTTGTGGTGGTGA
AAAACATGAAAATTGTTGGTCTCCACTGTTCTAGTGAAGATTTACATGCCGGGCAGATTGCTCTTATTAA
ACATGGGTCAAGGCTGAAAAACTGTGATCTTTATTTTTCCAGAAAACCATGTTCTGCTTGTTTGAAAATG
ATTGTAAATGCTGGAGTTAACCGAATTTCATACTGGCCTGCTGATCCAGAAATAAGTTTGCTTACGGAGG
CTTCTAGTTCTGAAGATGCAAAGTTAGATGCCAAAGCAGTGGAAAGATTGAAGTCAAACAGTCGGGCCCA
TGTGTGTGTCTTACTTCAACCTTTGGTGTGTTATATGGTGCAGTTTGTAGAGGAGACCTCTTACAAATGT
GACTTTATTCAAAAAATTACAAAAACATTGCCGGATGCTAACACTGACTTTTATTATGAATGTAAACAAG
AAAGAATAAAAGAATATGAAATGTTATTTTTGGTTTCAAATGAAGAAATGCATAAGCAAATACTGATGAC
TATAGGTTTGGAGAACCTGTGTGAAAATCCATACTTTAGCAATCTAAGGCAAAACATGAAAGACCTTATC
CTACTTTTGGCCACAGTAGCTTCCAGTGTGCCGAACTTTAAACACTTCGGATTTTACCGTAGCAATCCAG
AACAGATTAATGAAATTCACAATCAAAGTTTGCCACAGGAAATTGCAAGGCACTGCATGGTTCAGGCCAG
GTTATTGGCATATCGAACTGAGGATCATAAAACAGGAGTTGGGGCAGTCATTTGGGCAGAAGGGAAATCT
AGAAGTTGTGATGGAACAGGTGCCATGTACTTTGTAGGATGTGGTTACAATGCTTTTCCTGTTGGATCTG
AGTATGCTGACTTCCCACACATGGATGACAAGCAGAAAGACAGAGAAATAAGGAAATTCAGATACATCAT
ACATGCGGAACAGAATGCCTTGACATTTAGGTGTCAAGAAATAAAACCAGAAGAAAGAAGCATGATTTTT
GTGACAAAGTGCCCATGTGATGAGTGTGTACCTTTAATTAAAGGTGCAGGCATAAAACAAATCTATGCAG
GAGATGTAGATGTTGGAAAAAAGAAGGCAGACATCTCTTACATGAGGTTCGGGGAGCTTGAAGGTGTTAG
CAAATTTACGTGGCAGCTGAATCCATCAGGAGCTTATGGTCTTGAACAAAATGAGCCTGAAAGGAGAGAA
AATGGTGTGTTGAGACCTGTCCCACAGAAGGAAGAGCAGCACCAGGACAAGAAGCTGCGCCTCGGAATCC
ACTAA

Translation (514 aa):
MKEAGQMQNLESARAGRSVSTQTGSMTGQIPRLSKVNLFTLLSLWMELFPAEAQRQKSQKNEEGKHGPLG
DNEERTRVSTDKRQVKRTGLVVVKNMKIVGLHCSSEDLHAGQIALIKHGSRLKNCDLYFSRKPCSACLKM
IVNAGVNRISYWPADPEISLLTEASSSEDAKLDAKAVERLKSNSRAHVCVLLQPLVCYMVQFVEETSYKC
DFIQKITKTLPDANTDFYYECKQERIKEYEMLFLVSNEEMHKQILMTIGLENLCENPYFSNLRQNMKDLI
LLLATVASSVPNFKHFGFYRSNPEQINEIHNQSLPQEIARHCMVQARLLAYRTEDHKTGVGAVIWAEGKS
RSCDGTGAMYFVGCGYNAFPVGSEYADFPHMDDKQKDREIRKFRYIIHAEQNALTFRCQEIKPEERSMIF
VTKCPCDECVPLIKGAGIKQIYAGDVDVGKKKADISYMRFGELEGVSKFTWQLNPSGAYGLEQNEPERRE
NGVLRPVPQKEEQHQDKKLRLGIH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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