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Report for CCDS12500.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12500.1 Public Homo sapiens 19 ZNF585B 24 110 108 CCDS HistoryNCBI Gene:92285Re-query CCDS DB by CCDS ID:12500.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12500.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000532828.7 ENSP00000433773.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000532828.7Link to Ensembl Protein Viewer:ENSP00000433773.1Re-query CCDS DB by Nucleotide ID:ENST00000532828Re-query CCDS DB by Protein ID:ENSP00000433773
Original member Current member NCBI NM_152279.4 NP_689492.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152279.4Link to Protein Sequence:NP_689492.3Re-query CCDS DB by Nucleotide ID:NM_152279Re-query CCDS DB by Protein ID:NP_689492Link to BLAST:NP_689492.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689492.3 769 Q52M93 769 100% 0 0

Chromosomal Locations for CCDS 12500.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 37185227 37187244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37189661 37189753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37190024 37190150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37207040 37207111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2310 nt):
ATGCCAGCTAGTTGGACCTCACCCCAGAAATCCTCAGCCCTGGCTCCAGAGGATCATGGCAGCTCCTATG
AG
GGATCAGTGTCCTTCAGGGATGTGGCTATCGATTTCAGCAGAGAGGAATGGCGGCACCTGGACCTTTC
T
CAGAGAAACCTGTACCGGGATGTGATGCTGGAGACCTACAGCCACCTGCTCTCAGTAGGGTATCAAGTT
CCT
AAACCAGAGGTGGTCATGTTGGAGCAAGGAAAGGAACCATGGGCACTGCAGGGTGAGAGGCCACGTC
AC
AGCTGCCCAGGAGAGAAATTATGGGACCATAATCAACATAGAAAAATCATCGGTTATAAACCAGCTTC
C
TCTCAAGATCAAAAAATTTATTCTGGGGAAAAATCCTATGAGTGTGCTGAATTTGGAAAGAGCTTCACC
TGG
AAGTCACAGTTCAAGGTACATCTGAAAGTTCCTACAGGAGAAAAACTCTATGTATGTATTGAATGTG
GG
AGGGCTTTTGTACAGAAGCCAGAATTCATCACACATCAGAAAACCCATATGAGAGAGAAGCCCTATAA
G
TGCAATGAATGTGGAAAATCCTTTTTTCAAGTATCGTCTCTTTTCAGGCATCACAGAATTCATACCGGA
GAA
AAACTATATGAATGTAGTGAATGTGGGAAAGGTTTCCCTTATAACTCAGATCTCAGTATACATGAGA
AA
ATTCATACTGGAGAGAGACACCATGAATGCACTGACTGTGGCAAAGCGTTCACACAAAAGTCCACACT
C
AAGATTCATCAGAAAATCCATACAGGCGAGAGATCCTACATCTGTATTGAATGCGGGCAGGCCTTCATC
CAG
AAAACACAATTGATTGCACACCGAAGAATTCATAGTGGAGAAAAACCATATGAATGCAATAACTGTG
GC
AAATCCTTCATTTCCAAGTCACAACTTCAGGTACATCAACGTGTTCACACAAGAGTGAAGCCCTATAT
A
TGTACCGAATATGGGAAGGTCTTCAGCAATAATTCCAACCTCATTACACATGAGAAGATTCAAAGTAGA
GAG
AAATCTTCCATATGTACTGAGTGTGGGAAGGCCTTTACCTACAGGTCAGAGTTGATTATTCATCAGA
GA
ATTCACACTGGAGAGAAACCTTATGAATGCAGTGACTGTGGGAGAGCCTTCACTCAGAAGTCAGCACT
C
ACAGTGCATCAGAGAATTCATACAGGAGAAAAATCGTATATATGCATGAAATGTGGACTGGCCTTCATC
CGG
AAGGCACACTTGATTACACATCAAATAATTCATACTGGAGAGAAACCTTATAAATGTGGTCACTGTG
GG
AAATTGTTTACTTCCAAGTCACAACTCCATGTTCATAAACGAATTCACACAGGAGAAAAGCCCTATGT
A
TGCAATAAATGTGGGAAGGCATTCACCAACCGGTCAAATCTCATTACACATCAGAAAACTCATACAGGA
GAG
AAATCTTATATATGTTCCAAATGTGGAAAGGCCTTCACCCAGAGGTCAGACTTGATTACACATCAGA
GA
ATCCATACTGGGGAGAAGCCTTATGAATGCAATACTTGTGGAAAAGCCTTTACTCAGAAGTCAAATCT
T
AATATACATCAGAAAATTCACACTGGAGAGAGACAGTATGAATGCCACGAATGTGGGAAAGCCTTCAAC
CAG
AAATCAATACTCATTGTTCATCAGAAAATTCATACAGGAGAGAAACCCTATGTATGCACTGAGTGTG
GA
AGAGCTTTCATCCGCAAGTCAAACTTTATTACTCATCAAAGAATTCATACTGGAGAGAAGCCTTATGA
A
TGCAGTGACTGTGGGAAGTCCTTTACCTCCAAGTCTCAGCTCCTGGTGCATCAGCCAGTTCACACAGGA
GAG
AAACCCTATGTGTGTGCCGAGTGTGGGAAAGCCTTTAGTGGCAGGTCAAATCTCAGTAAGCACCAGA
AA
ACTCATACCGGAGAAAAGCCCTACATTTGTTCTGAATGTGGGAAGACCTTTCGACAGAAGTCAGAGTT
G
ATTACACATCACAGAATTCATACTGGAGAGAAACCTTATGAGTGCAGTGACTGTGGGAAGTCTTTCACT
AAA
AAATCACAGCTCCAAGTGCATCAGCGAATTCACACTGGAGAGAAGCCTTACGTGTGTGCTGAGTGTG
GG
AAGGCCTTTAGCAACAGGTCCAATTTGAATAAACATCAGACAACACACACTGGAGACAAACCCTACAA
G
TGTGGCATCTGTGGGAAAGGCTTCGTTCAGAAATCAGTGTTCAGTGTTCATCAGAGCAGCCACGCTTGA


Translation (769 aa):
MPASWTSPQKSSALAPEDHGSSYEGSVSFRDVAIDFSREEWRHLDLSQRNLYRDVMLETYSHLLSVGYQV
P
KPEVVMLEQGKEPWALQGERPRHSCP
GEKLWDHNQHRKIIGYKPASSQDQKIYSGEKSYECAEFGKSFT
W
KSQFKVHLKVPTGEKLYVCIECGRAFVQKPEFITHQKTHMREKPYKCNECGKSFFQVSSLFRHHRIHTG
E
KLYECSECGKGFPYNSDLSIHEKIHTGERHHECTDCGKAFTQKSTLKIHQKIHTGERSYICIECGQAFI
Q
KTQLIAHRRIHSGEKPYECNNCGKSFISKSQLQVHQRVHTRVKPYICTEYGKVFSNNSNLITHEKIQSR
E
KSSICTECGKAFTYRSELIIHQRIHTGEKPYECSDCGRAFTQKSALTVHQRIHTGEKSYICMKCGLAFI
R
KAHLITHQIIHTGEKPYKCGHCGKLFTSKSQLHVHKRIHTGEKPYVCNKCGKAFTNRSNLITHQKTHTG
E
KSYICSKCGKAFTQRSDLITHQRIHTGEKPYECNTCGKAFTQKSNLNIHQKIHTGERQYECHECGKAFN
Q
KSILIVHQKIHTGEKPYVCTECGRAFIRKSNFITHQRIHTGEKPYECSDCGKSFTSKSQLLVHQPVHTG
E
KPYVCAECGKAFSGRSNLSKHQKTHTGEKPYICSECGKTFRQKSELITHHRIHTGEKPYECSDCGKSFT
K
KSQLQVHQRIHTGEKPYVCAECGKAFSNRSNLNKHQTTHTGDKPYKCGICGKGFVQKSVFSVHQSSHA




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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