CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS50257.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
50257.1 |
Public |
Mus musculus |
18 |
Pcdhb7 |
23 |
108 |
98 |
|
Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 50257.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000053037.4 |
ENSMUSP00000051041.3 |
Accepted |
alive |
|
|
|
NCBI |
NM_053132.3 |
NP_444362.3 |
Accepted |
alive |
|
Chromosomal Locations for CCDS 50257.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2490 nt): ATGTTAAGATTCCTCCAAAGAAGAAATCAGAGTTCAGCATTTCAAAGCTTTGGAAATTCTAAAGGATTGG TTGCAAGCACTCAATGGGACCTCATGGAGAAGCTGGAGAAAGCTCACCCAAAAAGGCAAGTAATCGCTTT TATTTTTATGATGGTTTTGGTTCAGGTTTGCAGTGAGCCAACAACTCAATACTCTATCTTAGAGGAAACA GAAAGTGGCTCCTTTGTAGCCCACCTGGCCAAGGATCTGGGTCTGGGAGCTAGGGAGCTGGCTGCCAGGT CTGCACGGGTGGTGTCTGATGATTACAAGCAGAGATTGCTGCTGGATCCTGAGACTGGAGATTTGCTTCT GAGGGAGAAAGTAGACCGGGAGGAGGTGTGTAGCACTGTGGATCCCTGTGTGCTGCATTTCCAGGTGACT CTTGAAAAGCCAGTGCAATATTTTCAAGGAGAATTATTGATCCAGGACATAAATGATCATGCTCCAGAAT TTCCAGAAGGGGAAATGCTATTGAATATACCAGAAAACAGCCAGCCGGGCACTCTGTTACCACTGAATTT AGCCCAGGACTTGGATGTGGGCAGCAATGGGCTTCAACAATACACAGTCAGCCCCAACTCTCATTTTCAT GTCCTCACTCGAAATAATAGCGAGGGCAAGAAATACCCAGAGTTGGTGCAGGACAGAGCCCTGGACAGAG AGGAGCAGGCAGAGCTGAGCTTAACCCTCATAGCTCTGGATGGAGGGTCTCCACCGAGGTCAGGAACAGC TCTGGTTCGAATCCTGATCATGGACATCAATGACAATGCTCCTGAGTTTGTGAACAGCCCCTATGAGGTG CAGGTCCTAGAGAGCAGTCTCCCAGACTCCCCAGTCCTGACTGTCTTCGCACAGGATGCAGATGCTGGCA ACTTTGGGAGAGTTTCCTATGGCTTCTTTCAAGCATCAGATGAAATCCAGAGAACGTTCTCAATAAACAA AGTCACAGGAGAAATACAACTGAAAAAGGAATTGGATTTTGAAAAAATTAAATTTTACCATGTGAAAATT GAGGCCACGGATGGGGGAGGGCTTTCTGGGAAAGGCTTGGTAATAGTAGAGGTGTTGGATGTGAACGACA ATGCCCCAGAGCTGACCATATCTTCACTGACCAGCTCAGTCCCAGAAAATGCTCCTGAGACGATCATAAG CATCTTCAGAGTTGGAGACAGGGATTCCGGAGAGAATGCAAAGGTGGTTTGTTCTATTCCAGAGAATCTG CCATTCATTCTAAAATCTACCTTCAAGAATTTCTACACTCTGGTGACAGAGAGCCCTCTGGACAGAGAGA GCAGAGCTGAATACAACATTACCATCATGGTCTCCGACCTGGGCACACCCAGGCTCACAACATGGCACAC CATAACAGTGCAGGTGTCCGATGTCAACGACAATGCCCCCGCCTTCACCCGAACCTCCTACACCATGTTT GTCCGCGAAAACAACAGTCCTGCCCTGCACATAGGCACCATCAGTGCCACAGATTCAGACTCAGGCTCCA ATGCCCACATCACCTACTCGCTGCTGCTGCCCCATGATCCGGAGCTGCCACTCTCCTCGTTAATCTCCAT TAATGCTGACAACGGGCAGCTGTTCGCGCTCAGGGCGCTGGACTACGAGGTCCTGCAGGCCTTCGAGTTC CACGTGGGTGCCACAGACCGCGGCTCATCTGCGCTCAGCAGCCAGGCTCTGGTGCGCGTGGTGGTGCTGG ATGACAATGACAATGCGCCCTTCGTGCTCTACCCGATGCAGAACGCCTCTGCACCCTGCACAGAGCTGCT GCCCAGGGCGGCAGAGCCTGGATACCTGGTCACCAAGGTGGTGGCAGTGGACCGCGACTCTGGTCAAAAT GCCTGGCTGTCATTCCAGCTGCTCAAAGCCACGGAGCCCGGGCTGTTCAGCGTGTGGGCTCACAATGGCG AGGTGCGCACCAGCAGGCTGCTGAGCGAGCGAGATGCGCCCAAGCACAGGCTGCTGATGCTGGTCAAGGA TAATGGCGAGCCTCCGCGGTCTGCCAGTGTCACTCTTCATGTGCTGCTGGTGGATGGCTTTTCCCAACCC TACCTCTCTCTGCCTGAGGTGGCGCCCGACCCCACACAGGAAGTTGAGGATGCGCTCACTGTGTACCTGG TTATTGCCTTGGCATCTGTATCTTCTCTCTTCCTCTTGTCTGTGGTGCTTTTCGTGGGGATAAAGTTGTG CAGGAGAGCCAGGGAACCCTCTCTGGGTGGCTGCTCTGTGCCTGAGGAACTCTTTCCTGGCCACATGGTG GATGTCAGTGGCACAGGGACCTTGTCCCACAACTATCAATATGAAGTGTGTCTGACCAGGGACTCTGGGA TTGGTGAGTTCAAATTCCTCAAACCCATGATCCCCAACCTGTTGGTTCAAGACGCTGGGAGAGAACTTAA TGAAAATCTTCATTGCAGGGATAGCTTTGTATTCAGTTAA
Translation (829 aa): MLRFLQRRNQSSAFQSFGNSKGLVASTQWDLMEKLEKAHPKRQVIAFIFMMVLVQVCSEPTTQYSILEET ESGSFVAHLAKDLGLGARELAARSARVVSDDYKQRLLLDPETGDLLLREKVDREEVCSTVDPCVLHFQVT LEKPVQYFQGELLIQDINDHAPEFPEGEMLLNIPENSQPGTLLPLNLAQDLDVGSNGLQQYTVSPNSHFH VLTRNNSEGKKYPELVQDRALDREEQAELSLTLIALDGGSPPRSGTALVRILIMDINDNAPEFVNSPYEV QVLESSLPDSPVLTVFAQDADAGNFGRVSYGFFQASDEIQRTFSINKVTGEIQLKKELDFEKIKFYHVKI EATDGGGLSGKGLVIVEVLDVNDNAPELTISSLTSSVPENAPETIISIFRVGDRDSGENAKVVCSIPENL PFILKSTFKNFYTLVTESPLDRESRAEYNITIMVSDLGTPRLTTWHTITVQVSDVNDNAPAFTRTSYTMF VRENNSPALHIGTISATDSDSGSNAHITYSLLLPHDPELPLSSLISINADNGQLFALRALDYEVLQAFEF HVGATDRGSSALSSQALVRVVVLDDNDNAPFVLYPMQNASAPCTELLPRAAEPGYLVTKVVAVDRDSGQN AWLSFQLLKATEPGLFSVWAHNGEVRTSRLLSERDAPKHRLLMLVKDNGEPPRSASVTLHVLLVDGFSQP YLSLPEVAPDPTQEVEDALTVYLVIALASVSSLFLLSVVLFVGIKLCRRAREPSLGGCSVPEELFPGHMV DVSGTGTLSHNYQYEVCLTRDSGIGEFKFLKPMIPNLLVQDAGRELNENLHCRDSFVFS
|