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Report for CCDS86034.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86034.1 Public Homo sapiens 1 KIAA0040 24 110 108 CCDS HistoryNCBI Gene:9674Re-query CCDS DB by CCDS ID:86034.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86034.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000423313.6 ENSP00000462172.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000423313.6Link to Ensembl Protein Viewer:ENSP00000462172.1Re-query CCDS DB by Nucleotide ID:ENST00000423313Re-query CCDS DB by Protein ID:ENSP00000462172
Original member Current member EBI ENST00000444639.5 ENSP00000463734.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000444639.5Link to Ensembl Protein Viewer:ENSP00000463734.1Re-query CCDS DB by Nucleotide ID:ENST00000444639Re-query CCDS DB by Protein ID:ENSP00000463734
Original member Current member EBI ENST00000545251.6 ENSP00000464040.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000545251.6Link to Ensembl Protein Viewer:ENSP00000464040.1Re-query CCDS DB by Nucleotide ID:ENST00000545251Re-query CCDS DB by Protein ID:ENSP00000464040
Original member Current member NCBI NM_001162893.2 NP_001156365.1 Accepted alive Link to Nucleotide Sequence:NM_001162893.2Link to Protein Sequence:NP_001156365.1Re-query CCDS DB by Nucleotide ID:NM_001162893Re-query CCDS DB by Protein ID:NP_001156365Link to BLAST:NP_001156365.1
Original member Current member NCBI NM_001162894.2 NP_001156366.1 Accepted alive Link to Nucleotide Sequence:NM_001162894.2Link to Protein Sequence:NP_001156366.1Re-query CCDS DB by Nucleotide ID:NM_001162894Re-query CCDS DB by Protein ID:NP_001156366Link to BLAST:NP_001156366.1
Original member Current member NCBI NM_001162895.2 NP_001156367.1 Accepted alive Link to Nucleotide Sequence:NM_001162895.2Link to Protein Sequence:NP_001156367.1Re-query CCDS DB by Nucleotide ID:NM_001162895Re-query CCDS DB by Protein ID:NP_001156367Link to BLAST:NP_001156367.1
Original member Current member NCBI NM_001319230.2 NP_001306159.1 Accepted alive Link to Nucleotide Sequence:NM_001319230.2Link to Protein Sequence:NP_001306159.1Re-query CCDS DB by Nucleotide ID:NM_001319230Re-query CCDS DB by Protein ID:NP_001306159Link to BLAST:NP_001306159.1
Original member Current member NCBI NM_001319231.2 NP_001306160.1 Accepted alive Link to Nucleotide Sequence:NM_001319231.2Link to Protein Sequence:NP_001306160.1Re-query CCDS DB by Nucleotide ID:NM_001319231Re-query CCDS DB by Protein ID:NP_001306160Link to BLAST:NP_001306160.1
Original member Current member NCBI NM_014656.3 NP_055471.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014656.3Link to Protein Sequence:NP_055471.2Re-query CCDS DB by Nucleotide ID:NM_014656Re-query CCDS DB by Protein ID:NP_055471Link to BLAST:NP_055471.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001156365.1 99 Q15053 99 100% 0 0
NP_001156366.1 99 Q15053 99 100% 0 0
NP_001156367.1 99 Q15053 99 100% 0 0
NP_001306159.1 99 Q15053 99 100% 0 0
NP_001306160.1 99 Q15053 99 100% 0 0
NP_055471.2 99 Q15053 99 100% 0 0

Chromosomal Locations for CCDS 86034.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 175160714 175161013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (300 nt):
ATGGAGAGAATCAGTGCCTTCTTCAGCTCTATCTGGGACACCATCTTGACCAAACACCAAGAAGGCATCT
ACAACACCATCTGCCTGGGAGTCCTCCTGGGCCTGCCACTCTTGGTGATCATCACACTCCTCTTCATCTG
TTGCCATTGCTGCTGGAGCCCACCAGGCAAGAGGGGCCAGCAGCCAGAGAAGAACAAGAAGAAGAAGAAG
AAGAAGAAGAAGAAGGATGAAGAAGACCTCTGGATCTCTGCTCAACCCAAGCTTCTCCAGATGGAGAAGA
GACCATCACTGCCTGTTTAG

Translation (99 aa):
MERISAFFSSIWDTILTKHQEGIYNTICLGVLLGLPLLVIITLLFICCHCCWSPPGKRGQQPEKNKKKKK
KKKKKDEEDLWISAQPKLLQMEKRPSLPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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