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Report for CCDS10042.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10042.1 Public Homo sapiens 15 ZNF770 24 110 108 CCDS HistoryNCBI Gene:54989Re-query CCDS DB by CCDS ID:10042.1Re-query CCDS DB by GeneID:54989See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10042.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356321.4 ENSP00000348673.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000356321.4Link to Ensembl Protein Viewer:ENSP00000348673.4Re-query CCDS DB by Nucleotide ID:ENST00000356321Re-query CCDS DB by Protein ID:ENSP00000348673
Original member Current member NCBI NM_014106.4 NP_054825.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014106.4Link to Protein Sequence:NP_054825.2Re-query CCDS DB by Nucleotide ID:NM_014106Re-query CCDS DB by Protein ID:NP_054825Link to BLAST:NP_054825.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_054825.2 691 Q6IQ21 691 100% 0 0

Chromosomal Locations for CCDS 10042.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 34981359 34983434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2076 nt):
ATGATGGCTGAAAACAATTTAAAAATGCTAAAGATTCAACAGTGTGTGGTAGCCAACAAACTACCTAGAA
ACAGGCCATATGTTTGCAATATTTGTTTTAAGCACTTTGAAACACCATCAAAATTAGCTAGGCACTATCT
CATTCATACTGGTCAAAAGCCATTTGAATGTGATGTGTGTCATAAAACCTTTAGACAACTAGTTCATCTG
GAGAGGCATCAACTAACTCATAGTCTGCCTTTTAAATGTAGTATTTGTCAGCGTCACTTTAAAAATCTGA
AGACATTTGTGAAGCACCAACAACTTCACAATGAAACCTATCAGAATAATGTTAAACAGGTCAGAAGATT
GCTGGAGGCCAAGCAAGAAAAGTCAATGTATGGAGTGTATAATACTTTTACCACAGAGGAAAGATGGGCA
TTACACCCGTGCTCTAAGTCTGATCCCATGTATAGCATGAAAAGAAGAAAGAATATTCATGCATGTACAA
TCTGTGGCAAGATGTTTCCATCACAGTCAAAACTTGATAGGCATGTACTTATTCATACTGGTCAGAGGCC
TTTTAAATGTGTCTTGTGTACTAAATCTTTTCGACAGTCAACTCACTTAAAAATCCACCAACTTACACAT
TCAGAAGAAAGACCTTTTCAATGTTGTTTTTGTCAAAAAGGATTTAAGATTCAAAGCAAACTTCTGAAGC
ATAAACAAATCCATACTAGGAATAAGGCTTTTCGGGCTCTTTTATTAAAGAAGAGGCGTACAGAATCTCG
CCCCCTGCCTAATAAGTTAAATGCAAATCAGGGTGGTTTTGAAAATGGTGAGATTGGTGAATCTGAGGAG
AATAATCCACTTGATGTCCACTCAATTTATATTGTCCCTTTTCAATGTCCAAAGTGTGAAAAGTGTTTTG
AATCAGAGCAGATTCTCAATGAACACAGCTGTTTTGCTGCTAGAAGTGGCAAAATTCCAAGCAGGTTCAA
AAGAAGCTACAACTATAAAACCATTGTTAAAAAAATCTTGGCCAAGCTTAAGCGTGCTAGGAGTAAAAAA
TTAGATAACTTTCAATCTGAGAAAAAAGTATTTAAAAAGAGTTTCTTGAGAAATTGTGATCTTATTTCTG
GTGAGCAGAGCTCTGAACAAACCCAGAGAACATTTGTGGGTTCTCTTGGCAAACATGGAACATATAAAAC
AATTGGCAATAGAAAGAAGAAAACATTGACTTTGCCATTTTCTTGGCAAAATATGGGAAAAAATTTGAAA
GGCATCCTTACGACAGAAAACATATTAAGCATTGATAATTCAGTGAATAAGAAAGACTTGTCAATCTGTG
GTTCATCAGGTGAGGAATTCTTTAATAACTGTGAGGTACTTCAGTGTGGTTTTTCAGTTCCAAGGGAAAA
CATACGTACTAGACATAAGATATGTCCTTGTGACAAATGTGAGAAGGTATTTCCTTCTATATCCAAACTA
AAAAGACACTATTTAATTCATACTGGACAGAGGCCCTTTGGCTGTAATATTTGTGGGAAATCTTTTAGAC
AGTCAGCTCACTTAAAAAGACATGAACAGACTCATAATGAAAAGAGTCCTTATGCATCTCTTTGCCAAGT
AGAATTTGGAAACTTCAACAATCTTTCTAATCATTCAGGTAATAATGTTAACTATAATGCTTCCCAACAA
TGTCAGGCTCCTGGTGTTCAAAAATACGAGGTCTCAGAGTCAGATCAAATGTCAGGAGTTAAGGCAGAGT
CACAGGATTTTATTCCTGGTAGCACCGGGCAACCCTGTCTTCCTAATGTACTTTTGGAATCAGAGCAAAG
CAATCCTTTTTGCAGTTATTCAGAGCATCAGGAGAAAAATGATGTCTTCCTGTACCGATGCAGTGTTTGT
GCTAAAAGTTTCCGATCTCCATCTAAACTGGAAAGACACTACCTAATTCATGCAGGGCAGAAACCATTTG
AATGCTCAGTTTGTGGCAAAACATTCAGACAGGCTCCTCACTGGAAGAGACATCAGCTTACTCACTTTAA
AGAACGACCACAAGGGAAAGTGGTTGCCTTAGATTCGGTTATGTAA

Translation (691 aa):
MMAENNLKMLKIQQCVVANKLPRNRPYVCNICFKHFETPSKLARHYLIHTGQKPFECDVCHKTFRQLVHL
ERHQLTHSLPFKCSICQRHFKNLKTFVKHQQLHNETYQNNVKQVRRLLEAKQEKSMYGVYNTFTTEERWA
LHPCSKSDPMYSMKRRKNIHACTICGKMFPSQSKLDRHVLIHTGQRPFKCVLCTKSFRQSTHLKIHQLTH
SEERPFQCCFCQKGFKIQSKLLKHKQIHTRNKAFRALLLKKRRTESRPLPNKLNANQGGFENGEIGESEE
NNPLDVHSIYIVPFQCPKCEKCFESEQILNEHSCFAARSGKIPSRFKRSYNYKTIVKKILAKLKRARSKK
LDNFQSEKKVFKKSFLRNCDLISGEQSSEQTQRTFVGSLGKHGTYKTIGNRKKKTLTLPFSWQNMGKNLK
GILTTENILSIDNSVNKKDLSICGSSGEEFFNNCEVLQCGFSVPRENIRTRHKICPCDKCEKVFPSISKL
KRHYLIHTGQRPFGCNICGKSFRQSAHLKRHEQTHNEKSPYASLCQVEFGNFNNLSNHSGNNVNYNASQQ
CQAPGVQKYEVSESDQMSGVKAESQDFIPGSTGQPCLPNVLLESEQSNPFCSYSEHQEKNDVFLYRCSVC
AKSFRSPSKLERHYLIHAGQKPFECSVCGKTFRQAPHWKRHQLTHFKERPQGKVVALDSVM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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