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Report for CCDS10063.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10063.1 Public Homo sapiens 15 RMDN3 24 110 108 CCDS HistoryNCBI Gene:55177Re-query CCDS DB by CCDS ID:10063.1Re-query CCDS DB by GeneID:55177See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10063.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000260385.10 ENSP00000260385.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000260385.10Link to Ensembl Protein Viewer:ENSP00000260385.6Re-query CCDS DB by Nucleotide ID:ENST00000260385Re-query CCDS DB by Protein ID:ENSP00000260385
Original member Current member EBI ENST00000338376.8 ENSP00000342493.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000338376.8Link to Ensembl Protein Viewer:ENSP00000342493.3Re-query CCDS DB by Nucleotide ID:ENST00000338376Re-query CCDS DB by Protein ID:ENSP00000342493
Original member Current member NCBI NM_001304802.2 NP_001291731.1 Accepted alive Link to Nucleotide Sequence:NM_001304802.2Link to Protein Sequence:NP_001291731.1Re-query CCDS DB by Nucleotide ID:NM_001304802Re-query CCDS DB by Protein ID:NP_001291731Link to BLAST:NP_001291731.1
Original member Current member NCBI NM_001323894.2 NP_001310823.1 Accepted alive Link to Nucleotide Sequence:NM_001323894.2Link to Protein Sequence:NP_001310823.1Re-query CCDS DB by Nucleotide ID:NM_001323894Re-query CCDS DB by Protein ID:NP_001310823Link to BLAST:NP_001310823.1
Original member Current member NCBI NM_018145.3 NP_060615.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018145.3Link to Protein Sequence:NP_060615.1Re-query CCDS DB by Nucleotide ID:NM_018145Re-query CCDS DB by Protein ID:NP_060615Link to BLAST:NP_060615.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001291731.1 470 Q96TC7-1 470 100% 0 0
NP_001310823.1 470 Q96TC7-1 470 100% 0 0
NP_060615.1 470 Q96TC7-1 470 100% 0 0

Chromosomal Locations for CCDS 10063.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 40736541 40736594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40737124 40737204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40737288 40737341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40737628 40737726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40737965 40738042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40738501 40738576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40740133 40740193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40744047 40744149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40744977 40745259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40751426 40751569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40751986 40752178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40754597 40754783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1413 nt):
ATGTCTAGACTGGGAGCCCTGGGTGGTGCCCGTGCCGGGCTGGGACTGTTGCTGGGTACCGCCGCCGGCC
TTGGATTCCTGTGCCTCCTTTACAGCCAGCGATGGAAACGGACCCAGCGTCATGGCCGCAGCCAGAGCCT
GCCCAACTCCCTGGACTATACGCAGACTTCAGATCCCGGACGCCACGTGATGCTCCTGCGGGCTGTCCCA
GGTGGGGCTGGAGATGCCTCAGTGCTGCCCAGCCTTCCACGGGAAGGACAGGAGAAGGTGCTGGACCGCC
TGGACTTTGTGCTGACCAGCCTTGTGGCGCTGCGGCGGGAGGTGGAGGAGCTGAGAAGCAGCCTGCGAGG
GCTTGCGGGGGAGATTGTTGGGGAGGTCCGATGCCACATGGAAGAGAACCAGAGAGTGGCTCGGCGGCGA
AGGTTTCCGTTTGTCCGGGAGAGGAGTGACTCCACTGGCTCCAGCTCTGTCTACTTCACGGCCTCCTCGG
GAGCCACGTTCACAGATGCTGAGAGTGAAGGGGGTTACACAACAGCCAATGCGGAGTCTGACAATGAGCG
GGACTCTGACAAAGAAAGTGAGGACGGGGAAGATGAAGTGAGCTGTGAGACTGTGAAGATGGGGAGAAAG
GATTCTCTTGACTTGGAGGAAGAGGCAGCTTCAGGTGCCTCCAGTGCCCTGGAGGCTGGAGGTTCCTCAG
GCTTGGAGGATGTGCTGCCCCTCCTGCAGCAGGCCGACGAGCTGCACAGGGGTGATGAGCAAGGCAAGCG
GGAGGGCTTCCAGCTGCTGCTCAACAACAAGCTGGTGTATGGAAGCCGGCAGGACTTTCTCTGGCGCCTG
GCCCGAGCCTACAGTGACATGTGTGAGCTCACTGAGGAGGTGAGCGAGAAGAAGTCATATGCCCTAGATG
GAAAAGAAGAAGCAGAGGCTGCTCTGGAGAAGGGGGATGAGAGTGCTGACTGTCACCTGTGGTATGCGGT
GCTTTGTGGTCAGCTGGCTGAGCATGAGAGCATCCAGAGGCGCATCCAGAGTGGCTTTAGCTTCAAGGAG
CATGTGGACAAAGCCATTGCTCTCCAGCCAGAAAACCCCATGGCTCACTTTCTTCTTGGCAGGTGGTGCT
ATCAGGTCTCTCACCTGAGCTGGCTAGAAAAAAAAACTGCTACAGCCTTGCTTGAAAGCCCTCTCAGTGC
CACTGTGGAAGATGCCCTCCAGAGCTTCCTAAAGGCTGAAGAACTACAGCCAGGATTTTCCAAAGCAGGA
AGGGTATATATTTCCAAGTGCTACAGAGAACTAGGGAAAAACTCTGAAGCTAGATGGTGGATGAAGTTGG
CCCTGGAGCTGCCAGATGTCACGAAGGAGGATTTGGCTATCCAGAAGGACCTGGAAGAACTGGAAGTCAT
TTTACGAGACTAA

Translation (470 aa):
MSRLGALGGARAGLGLLLGTAAGLGFLCLLYSQRWKRTQRHGRSQSLPNSLDYTQTSDPGRHVMLLRAVP
GGAGDASVLPSLPREGQEKVLDRLDFVLTSLVALRREVEELRSSLRGLAGEIVGEVRCHMEENQRVARRR
RFPFVRERSDSTGSSSVYFTASSGATFTDAESEGGYTTANAESDNERDSDKESEDGEDEVSCETVKMGRK
DSLDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHRGDEQGKREGFQLLLNNKLVYGSRQDFLWRL
ARAYSDMCELTEEVSEKKSYALDGKEEAEAALEKGDESADCHLWYAVLCGQLAEHESIQRRIQSGFSFKE
HVDKAIALQPENPMAHFLLGRWCYQVSHLSWLEKKTATALLESPLSATVEDALQSFLKAEELQPGFSKAG
RVYISKCYRELGKNSEARWWMKLALELPDVTKEDLAIQKDLEELEVILRD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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