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Report for CCDS10104.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10104.2 Public Homo sapiens 15 HYPK 24 110 108 CCDS HistoryNCBI Gene:25764Re-query CCDS DB by CCDS ID:10104.2Re-query CCDS DB by GeneID:25764See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 10104.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000406925.6 ENSP00000384474.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000406925.6Link to Ensembl Protein Viewer:ENSP00000384474.2Re-query CCDS DB by Nucleotide ID:ENST00000406925Re-query CCDS DB by Protein ID:ENSP00000384474
Original member Current member EBI ENST00000442995.4 ENSP00000401155.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000442995.4Link to Ensembl Protein Viewer:ENSP00000401155.3Re-query CCDS DB by Nucleotide ID:ENST00000442995Re-query CCDS DB by Protein ID:ENSP00000401155
Original member Current member NCBI NM_016400.4 NP_057484.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016400.4Link to Protein Sequence:NP_057484.4Re-query CCDS DB by Nucleotide ID:NM_016400Re-query CCDS DB by Protein ID:NP_057484Link to BLAST:NP_057484.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057484.4 121 Q9NX55-2 121 100% 0 0

Chromosomal Locations for CCDS 10104.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 43800623 43800784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43801132 43801187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43801518 43801569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43801711 43801806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (366 nt):
ATGGCGACCGAGGGGGATGTGGAGCTGGAGTTGGAGACTGAGACCAGTGGACCAGAGCGGCCTCCGGAGA
AGCCACGGAAACATGACAGCGGTGCGGCGGACTTGGAGCGGGTCACCGACTATGCAGAGGAGAAGGAGAT
CCAGAGTTCCAATCTGGAGACGGCCATGTCTGTGATTGGAGACAGAAGGTCCCGGGAGCAGAAAGCCAAA
CAGGAGCGGGAGAAAGAACTGGCAAAAGTCACTATCAAGAAGGAAGATCTGGAGCTAATAATGACTGAGA
TGGAGATATCTCGAGCAGCAGCAGAACGCAGTTTGCGGGAACACATGGGCAACGTGGTAGAGGCGCTTAT
TGCCCTAACCAACTGA

Translation (121 aa):
MATEGDVELELETETSGPERPPEKPRKHDSGAADLERVTDYAEEKEIQSSNLETAMSVIGDRRSREQKAK
QEREKELAKVTIKKEDLELIMTEMEISRAAAERSLREHMGNVVEALIALTN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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