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Report for CCDS10453.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10453.1 Public Homo sapiens 16 TBL3 24 110 108 CCDS HistoryNCBI Gene:10607Re-query CCDS DB by CCDS ID:10453.1Re-query CCDS DB by GeneID:10607See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10453.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000568546.6 ENSP00000454836.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000568546.6Link to Ensembl Protein Viewer:ENSP00000454836.1Re-query CCDS DB by Nucleotide ID:ENST00000568546Re-query CCDS DB by Protein ID:ENSP00000454836
Original member Current member NCBI NM_006453.3 NP_006444.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006453.3Link to Protein Sequence:NP_006444.2Re-query CCDS DB by Nucleotide ID:NM_006453Re-query CCDS DB by Protein ID:NP_006444Link to BLAST:NP_006444.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006444.2 808 Q12788 808 100% 0 0

Chromosomal Locations for CCDS 10453.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 1972165 1972205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1974056 1974107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1974197 1974292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1974376 1974423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1974538 1974679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1974763 1974847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1974928 1975098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1975187 1975262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1975345 1975438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1975529 1975710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1975808 1975949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1976056 1976114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1976211 1976314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1976814 1976961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1977054 1977284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1977356 1977426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1977514 1977670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1977742 1977800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1977958 1978061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1978149 1978220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1978313 1978471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1978552 1978685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2427 nt):
ATGGCAGAGACCGCGGCCGGAGTGGGCCGCTTCAAGACCAACTATGCTGTGGAGCGCAAAATTGAGCCTT
TCTACAAGGGCGGAAAAGCACAGCTGGACCAGACTGGCCAGCACCTCTTCTGCGTCTGTGGCACCAGAGT
CAACATTCTGGAAGTGGCCTCGGGGGCCGTGCTGCGGAGTCTGGAGCAGGAGGACCAGGAGGACATCACT
GCCTTTGACCTCAGCCCTGACAACGAGGTGCTGGTGACAGCCAGTCGGGCATTGCTGCTGGCTCAGTGGG
CCTGGCAAGAGGGCAGCGTTACCCGCCTGTGGAAGGCGATACACACGGCCCCCGTGGCCACCATGGCCTT
CGACCCCACCTCCACTCTGCTAGCCACAGGTGGCTGTGATGGGGCCGTGCGCGTCTGGGACATCGTGCGG
CACTACGGGACACACCACTTCCGAGGCTCGCCCGGTGTCGTGCACCTAGTGGCCTTCCACCCGGACCCTA
CACGCCTGCTGCTCTTCTCCTCGGCCACGGATGCCGCCATCCGCGTGTGGTCACTGCAGGACCGGTCATG
CCTGGCTGTGCTGACTGCCCACTACAGCGCCGTCACCTCACTGGCCTTCAGCGCCGACGGCCACACCATG
CTCAGCTCCGGCCGTGACAAGATATGTATCATCTGGGACCTTCAGAGCTGCCAGGCCACGAGGACCGTGC
CTGTGTTTGAGAGCGTGGAGGCTGCTGTGCTGTTGCCAGAGGAGCCAGTGTCCCAGCTGGGTGTGAAGTC
CCCAGGGCTGTACTTTCTGACAGCTGGCGACCAAGGCACTCTGCGCGTGTGGGAGGCAGCTTCTGGGCAG
TGTGTGTACACGCAGGCCCAGCCGCCGGGCCCTGGGCAGGAGCTGACCCACTGCACCCTGGCACACACCG
CCGGCGTGGTCCTCACCGCCACCGCCGACCACAACCTGTTGCTCTACGAGGCTCGCTCCCTGCGGCTGCA
GAAACAGTTCGCTGGCTACAGTGAGGAGGTTTTGGATGTCCGGTTTCTTGGGCCCGAGGACTCCCACGTT
GTCGTGGCCTCCAATAGCCCCTGCCTAAAAGTGTTTGAGCTGCAGACGTCAGCCTGCCAGATCCTCCACG
GCCACACGGATATCGTCCTGGCCCTGGATGTGTTCCGGAAGGGGTGGCTCTTTGCCAGCTGTGCCAAGGA
TCAGAGCGTCCGTATCTGGAGAATGAACAAGGCTGGCCAGGTGATGTGCGTGGCTCAGGGTTCCGGTCAC
ACACACAGTGTGGGCACCGTCTGCTGCTCTAGGCTGAAGGAGTCCTTCCTGGTGACAGGCAGCCAGGACT
GCACTGTGAAGCTGTGGCCTCTTCCCAAAGCCTTGCTGTCCAAGAACACAGCCCCAGACAACGGCCCTAT
CCTCCTGCAGGCCCAGACCACTCAGCGCTGCCATGATAAGGACATCAACAGCGTGGCTATTGCCCCCAAC
GACAAGCTGCTGGCCACAGGCTCACAGGACCGCACGGCCAAGCTCTGGGCCCTGCCACAGTGCCAGCTGC
TGGGTGTCTTCTCAGGCCACCGGCGTGGCCTCTGGTGCGTCCAGTTCTCTCCCATGGACCAGGTGCTGGC
CACGGCCTCAGCTGATGGCACCATCAAGCTCTGGGCACTCCAGGACTTCAGCTGTCTCAAGACATTTGAG
GGGCACGATGCTTCTGTGCTGAAGGTGGCCTTTGTGAGCCGTGGCACGCAGCTGCTGTCCAGCGGTTCGG
ATGGCCTCGTGAAGCTCTGGACCATCAAGAACAACGAGTGTGTGCGGACGCTGGATGCCCACGAGGACAA
GGTCTGGGGGCTGCACTGCAGCCGGCTGGACGACCACGCCCTCACTGGGGCCAGTGACTCCCGAGTCATC
CTCTGGAAGGATGTGACCGAGGCGGAGCAGGCAGAGGAGCAGGCCAGGCAAGAGGAGCAGGTGGTCAGGC
AGCAAGAGCTGGACAACCTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGGCCTGGCCATCTCCCTGGA
TCGGCCCCACACCGTGCTGACTGTCATCCAGGCCATCCGGAGGGACCCTGAGGCCTGCGAGAAGCTGGAA
GCCACCATGCTCCGACTGCGGCGCGACCAGAAAGAGGCCCTGCTGCGCTTCTGCGTCACGTGGAACACCA
ACTCGCGGCACTGCCACGAGGCCCAGGCCGTGCTGGGTGTGCTCTTGAGGCGAGAGGCCCCCGAGGAGCT
GCTGGCCTACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGCACTTTCAGCGG
CTCAGCAGGACCCTCCAGGCCGCCGCTTTCTTGGACTTCCTGTGGCACAACATGAAGCTCCCTGTGCCGG
CCGCCGCCCCCACCCCCTGGGAAACCCATAAAGGCGCACTGCCCTAG

Translation (808 aa):
MAETAAGVGRFKTNYAVERKIEPFYKGGKAQLDQTGQHLFCVCGTRVNILEVASGAVLRSLEQEDQEDIT
AFDLSPDNEVLVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATGGCDGAVRVWDIVR
HYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAFSADGHTM
LSSGRDKICIIWDLQSCQATRTVPVFESVEAAVLLPEEPVSQLGVKSPGLYFLTAGDQGTLRVWEAASGQ
CVYTQAQPPGPGQELTHCTLAHTAGVVLTATADHNLLLYEARSLRLQKQFAGYSEEVLDVRFLGPEDSHV
VVASNSPCLKVFELQTSACQILHGHTDIVLALDVFRKGWLFASCAKDQSVRIWRMNKAGQVMCVAQGSGH
THSVGTVCCSRLKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAPN
DKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFE
GHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDHALTGASDSRVI
LWKDVTEAEQAEEQARQEEQVVRQQELDNLLHEKRYLRALGLAISLDRPHTVLTVIQAIRRDPEACEKLE
ATMLRLRRDQKEALLRFCVTWNTNSRHCHEAQAVLGVLLRREAPEELLAYEGVRAALEALLPYTERHFQR
LSRTLQAAAFLDFLWHNMKLPVPAAAPTPWETHKGALP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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