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Report for CCDS10664.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10664.1 Public Homo sapiens 16 HIRIP3 24 110 108 CCDS HistoryNCBI Gene:8479Re-query CCDS DB by CCDS ID:10664.1Re-query CCDS DB by GeneID:8479See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10664.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000279392.8 ENSP00000279392.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000279392.8Link to Ensembl Protein Viewer:ENSP00000279392.3Re-query CCDS DB by Nucleotide ID:ENST00000279392Re-query CCDS DB by Protein ID:ENSP00000279392
Original member Current member NCBI NM_003609.5 NP_003600.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003609.5Link to Protein Sequence:NP_003600.2Re-query CCDS DB by Nucleotide ID:NM_003609Re-query CCDS DB by Protein ID:NP_003600Link to BLAST:NP_003600.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003600.2 556 Q9BW71-1 556 100% 0 0

Chromosomal Locations for CCDS 10664.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 29993207 29993370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 29993459 29993557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 29993640 29993808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 29993906 29994843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 29995103 29995217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 29995343 29995463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 29995541 29995605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1671 nt):
ATGGCGCGGGAGAAGGAGATGCAGGAGTTCACCCGTAGCTTCTTCCGAGGCCGCCCGGACCTCAGCACGC
TTACGCATTCCATCGTGCGGCGGAGGTACTTAGCTCACTCGGGCCGCAGCCACCTGGAGCCCGAGGAGAA
GCAGGCACTGAAGCGGCTGGTGGAGGAGGAGCTGCTGAAGATGCAGGTGGATGAAGCCGCTTCCAGGGAA
GACAAACTGGACCTTACCAAGAAGGGCAAGAGGCCTCCCACCCCTTGTAGCGACCCGGAGAGAAAAAGGT
TCCGCTTCAATTCAGAGTCGGAGTCCGGCTCTGAAGCCTCCAGCCCAGACTACTTTGGACCCCCAGCAAA
GAATGGGGTGGCAGCAGAAGTCAGCCCAGCCAAAGAGGAGAATCCAAGGCGAGCCTCAAAGGCAGTTGAG
GAGAGCAGTGATGAGGAACGGCAGAGGGACCTGCCCGCACAGAGGGGAGAGGAGAGCAGTGAGGAGGAGG
AAAAGGGGTACAAGGGGAAGACTAGGAAGAAACCTGTGGTAAAGAAGCAGGCACCAGGCAAGGCCTCAGT
CAGTAGGAAGCAGGCCAGGGAAGAAAGTGAGGAGAGCGAGGCAGAACCCGTTCAGAGGACAGCAAAGAAG
GTGGAGGGAAATAAAGGAACTAAAAGCCTGAAGGAAAGTGAACAGGAGAGTGAAGAGGAGATCCTAGCCC
AGAAGAAAGAGCAGAGAGAGGAGGAAGTGGAGGAGGAAGAGAAAGAAGAGGATGAGGAAAAGGGGGATTG
GAAACCCAGAACCAGGAGCAATGGCCGGAGAAAGTCAGCTAGGGAGGAGAGGAGCTGTAAGCAGAAAAGC
CAGGCAAAGAGGCTCTTGGGAGACTCAGACAGCGAGGAAGAGCAGAAAGAGGCAGCCAGCAGTGGGGATG
ACAGTGGGAGAGATAGAGAACCCCCAGTGCAGAGGAAGAGTGAGGACAGGACCCAGCTTAAGGGTGGGAA
GAGGTTGAGTGGAAGCAGCGAGGACGAGGAAGACAGTGGGAAGGGGGAACCCACAGCTAAAGGCTCTAGA
AAGATGGCCAGACTGGGCAGCACCAGTGGTGAGGAAAGTGACTTGGAGAGGGAGGTAAGTGACAGCGAGG
CAGGGGGAGGCCCCCAGGGGGAGAGGAAGAACCGCTCTTCCAAGAAGAGCTCCAGGAAAGGCAGGACACG
AAGCTCCTCTTCCTCCTCAGATGGAAGTCCAGAGGCCAAAGGAGGGAAGGCTGGCTCAGGTCGCCGTGGA
GAGGACCACCCGGCTGTGATGAGGCTGAAGCGCTACATTCGGGCCTGTGGTGCCCATCGAAACTACAAGA
AGCTGTTGGGCTCCTGTTGCTCACACAAGGAGCGCCTGAGTATCCTCCGGGCAGAACTGGAAGCGCTAGG
CATGAAGGGTACCCCTTCCCTAGGGAAGTGTCGGGCCCTGAAGGAGCAGAGGGAGGAGGCAGCTGAGGTG
GCCTCCTTGGATGTTGCGAACATCATCAGTGGCTCGGGCCGGCCACGCAGACGTACAGCCTGGAACCCTT
TAGGAGAAGCAGCACCCCCAGGGGAGCTGTACCGACGGACCCTGGACTCAGATGAAGAGCGGCCCCGTCC
CGCACCCCCAGACTGGTCACATATGCGTGGCATCATCAGCAGTGATGGCGAGAGTAACTGA

Translation (556 aa):
MAREKEMQEFTRSFFRGRPDLSTLTHSIVRRRYLAHSGRSHLEPEEKQALKRLVEEELLKMQVDEAASRE
DKLDLTKKGKRPPTPCSDPERKRFRFNSESESGSEASSPDYFGPPAKNGVAAEVSPAKEENPRRASKAVE
ESSDEERQRDLPAQRGEESSEEEEKGYKGKTRKKPVVKKQAPGKASVSRKQAREESEESEAEPVQRTAKK
VEGNKGTKSLKESEQESEEEILAQKKEQREEEVEEEEKEEDEEKGDWKPRTRSNGRRKSAREERSCKQKS
QAKRLLGDSDSEEEQKEAASSGDDSGRDREPPVQRKSEDRTQLKGGKRLSGSSEDEEDSGKGEPTAKGSR
KMARLGSTSGEESDLEREVSDSEAGGGPQGERKNRSSKKSSRKGRTRSSSSSSDGSPEAKGGKAGSGRRG
EDHPAVMRLKRYIRACGAHRNYKKLLGSCCSHKERLSILRAELEALGMKGTPSLGKCRALKEQREEAAEV
ASLDVANIISGSGRPRRRTAWNPLGEAAPPGELYRRTLDSDEERPRPAPPDWSHMRGIISSDGESN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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