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Report for CCDS11255.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11255.1 Public Homo sapiens 17 NSRP1 24 110 108 CCDS HistoryNCBI Gene:84081Re-query CCDS DB by CCDS ID:11255.1Re-query CCDS DB by GeneID:84081See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11255.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000247026.10 ENSP00000247026.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000247026.10Link to Ensembl Protein Viewer:ENSP00000247026.5Re-query CCDS DB by Nucleotide ID:ENST00000247026Re-query CCDS DB by Protein ID:ENSP00000247026
Original member Current member NCBI NM_032141.4 NP_115517.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032141.4Link to Protein Sequence:NP_115517.1Re-query CCDS DB by Nucleotide ID:NM_032141Re-query CCDS DB by Protein ID:NP_115517Link to BLAST:NP_115517.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115517.1 558 Q9H0G5 558 100% 0 0

Chromosomal Locations for CCDS 11255.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 30116844 30116863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30118080 30118173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30172542 30172598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30178071 30178199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30179090 30179297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30180908 30181016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30184615 30185674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1677 nt):
ATGGCGATTCCGGGCAGGCAGTATGGGCTTATTTTGCCAAAGAAAACACAGCAGTTGCACCCTGTTTTGC
AAAAACCATCAGTGTTTGGGAATGATTCTGATGATGATGATGAGACCTCTGTGAGTGAAAGCCTTCAGAG
GGAAGCTGCTAAGAAGCAGGCCATGAAACAGACCAAACTGGAAATCCAGAAGGCCCTTGCAGAAGATGCT
ACTGTGTATGAATATGACAGTATTTATGATGAAATGCAGAAAAAAAAGGAGGAAAATAATCCCAAATTGC
TTTTGGGGAAAGACAGAAAGCCCAAGTATATTCACAACTTGCTAAAAGCAGTTGAGATCAGAAAAAAGGA
ACAGGAAAAAAGAATGGAAAAGAAAATACAGAGAGAACGAGAAATGGAAAAGGGGGAGTTTGATGATAAA
GAAGCATTTGTGACATCTGCATATAAGAAAAAACTGCAAGAGAGAGCTGAAGAAGAAGAAAGAGAAAAGA
GGGCTGCTGCACTGGAAGCATGTTTGGATGTAACCAAGCAGAAAGATCTCAGTGGATTTTATAGGCACCT
ATTAAATCAAGCAGTTGGTGAAGAGGAAGTACCTAAATGCAGCTTTCGTGAAGCCAGATCTGGTATAAAG
GAAGAAAAATCAAGGGGCTTCTCCAATGAAGTAAGTTCAAAAAACAGAATACCACAAGAGAAATGCATTC
TTCAAACTGATGTGAAAGTAGAGGAAAACCCAGATGCAGACAGTGACTTCGATGCTAAGAGCAGTGCGGA
TGATGAAATAGAAGAAACTAGAGTGAACTGCAGAAGGGAAAAGGTCATAGAGACCCCTGAGAATGACTTC
AAGCACCACAGGAGTCAAAACCACTCTCGGTCACCTAGTGAAGAAAGAGGGCACAGTACCAGGCACCACA
CGAAAGGATCACGAACGTCGAGAGGACATGAGAAAAGGGAAGATCAGCACCAGCAGAAGCAATCCAGAGA
CCAAGAGAACCATTACACTGACCGTGATTACCGGAAAGAAAGGGATTCTCATAGGCACAGAGAGGCCAGT
CATAGAGATTCCCATTGGAAGAGGCATGAACAGGAAGATAAACCAAGGGCGAGGGACCAAAGAGAAAGAA
GTGACAGAGTATGGAAAAGGGAGAAAGATAGGGAGAAATATTCCCAAAGAGAACAAGAAAGAGATAGACA
ACAAAATGATCAGAACCGACCCAGTGAGAAAGGAGAGAAGGAAGAGAAAAGCAAAGCAAAGGAAGAGCAT
ATGAAAGTAAGGAAGGAAAGATATGAAAATAATGATAAATACAGAGATAGAGAAAAACGAGAGGTAGGTG
TTCAGTCTTCAGAAAGAAATCAAGACAGAAAGGAAAGCAGCCCAAATTCTAGGGCAAAGGATAAATTTCT
TGACCAAGAAAGATCCAACAAAATGAGAAACATGGCAAAGGACAAAGAAAGAAACCAAGAGAAACCCTCT
AATTCTGAATCATCACTGGGAGCAAAACACAGACTCACAGAGGAAGGGCAAGAGAAGGGTAAAGAACAAG
AGAGACCACCTGAGGCAGTGAGCAAGTTTGCAAAGCGGAACAATGAAGAAACTGTAATGTCAGCTAGAGA
CAGGTACTTGGCCAGGCAGATGGCGCGGGTTAATGCAAAGACCTATATTGAGAAAGAAGATGATTGA

Translation (558 aa):
MAIPGRQYGLILPKKTQQLHPVLQKPSVFGNDSDDDDETSVSESLQREAAKKQAMKQTKLEIQKALAEDA
TVYEYDSIYDEMQKKKEENNPKLLLGKDRKPKYIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDK
EAFVTSAYKKKLQERAEEEEREKRAAALEACLDVTKQKDLSGFYRHLLNQAVGEEEVPKCSFREARSGIK
EEKSRGFSNEVSSKNRIPQEKCILQTDVKVEENPDADSDFDAKSSADDEIEETRVNCRREKVIETPENDF
KHHRSQNHSRSPSEERGHSTRHHTKGSRTSRGHEKREDQHQQKQSRDQENHYTDRDYRKERDSHRHREAS
HRDSHWKRHEQEDKPRARDQRERSDRVWKREKDREKYSQREQERDRQQNDQNRPSEKGEKEEKSKAKEEH
MKVRKERYENNDKYRDREKREVGVQSSERNQDRKESSPNSRAKDKFLDQERSNKMRNMAKDKERNQEKPS
NSESSLGAKHRLTEEGQEKGKEQERPPEAVSKFAKRNNEETVMSARDRYLARQMARVNAKTYIEKEDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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