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Report for CCDS11472.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11472.1 Public Homo sapiens 17 PPY 24 110 108 CCDS HistoryNCBI Gene:5539Re-query CCDS DB by CCDS ID:11472.1Re-query CCDS DB by GeneID:5539See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11472.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000225992.8 ENSP00000225992.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000225992.8Link to Ensembl Protein Viewer:ENSP00000225992.3Re-query CCDS DB by Nucleotide ID:ENST00000225992Re-query CCDS DB by Protein ID:ENSP00000225992
Original member Current member EBI ENST00000591228.4 ENSP00000466009.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000591228.4Link to Ensembl Protein Viewer:ENSP00000466009.1Re-query CCDS DB by Nucleotide ID:ENST00000591228Re-query CCDS DB by Protein ID:ENSP00000466009
Original member Current member NCBI NM_002722.5 NP_002713.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002722.5Link to Protein Sequence:NP_002713.1Re-query CCDS DB by Nucleotide ID:NM_002722Re-query CCDS DB by Protein ID:NP_002713Link to BLAST:NP_002713.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002713.1 95 P01298-1 95 100% 0 0

Chromosomal Locations for CCDS 11472.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 43940928 43940952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43941143 43941214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43941464 43941654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (288 nt):
ATGGCTGCCGCACGCCTCTGCCTCTCCCTGCTGCTCCTGTCCACCTGCGTGGCTCTGTTACTACAGCCAC
TGCTGGGTGCCCAGGGAGCCCCACTGGAGCCAGTGTACCCAGGGGACAATGCCACACCAGAGCAGATGGC
CCAGTATGCAGCTGATCTCCGTAGATACATCAACATGCTGACCAGGCCTAGGTATGGGAAAAGACACAAA
GAGGACACGCTGGCCTTCTCGGAGTGGGGGTCCCCGCATGCTGCTGTCCCCAGGGAGCTCAGCCCGCTGG
ACTTATAA

Translation (95 aa):
MAAARLCLSLLLLSTCVALLLQPLLGAQGAPLEPVYPGDNATPEQMAQYAADLRRYINMLTRPRYGKRHK
EDTLAFSEWGSPHAAVPRELSPLDL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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