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Report for CCDS1155.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1155.1 Public Homo sapiens 1 MRPL24 24 110 108 CCDS HistoryNCBI Gene:79590Re-query CCDS DB by CCDS ID:1155.1Re-query CCDS DB by GeneID:79590See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1155.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361531.6 ENSP00000354525.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361531.6Link to Ensembl Protein Viewer:ENSP00000354525.2Re-query CCDS DB by Nucleotide ID:ENST00000361531Re-query CCDS DB by Protein ID:ENSP00000354525
Original member Current member EBI ENST00000368211.8 ENSP00000357194.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000368211.8Link to Ensembl Protein Viewer:ENSP00000357194.4Re-query CCDS DB by Nucleotide ID:ENST00000368211Re-query CCDS DB by Protein ID:ENSP00000357194
Original member Current member NCBI NM_024540.4 NP_078816.2 Accepted alive Link to Nucleotide Sequence:NM_024540.4Link to Protein Sequence:NP_078816.2Re-query CCDS DB by Nucleotide ID:NM_024540Re-query CCDS DB by Protein ID:NP_078816Link to BLAST:NP_078816.2
Original member Current member NCBI NM_145729.3 NP_663781.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145729.3Link to Protein Sequence:NP_663781.1Re-query CCDS DB by Nucleotide ID:NM_145729Re-query CCDS DB by Protein ID:NP_663781Link to BLAST:NP_663781.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078816.2 216 Q96A35 216 100% 0 0
NP_663781.1 216 Q96A35 216 100% 0 0

Chromosomal Locations for CCDS 1155.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 156737398 156737534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156737646 156737776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156738031 156738134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156738343 156738438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156738522 156738704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (651 nt):
ATGCGTCTTTCTGCCCTGCTGGCCTTGGCATCCAAGGTCACTCTGCCCCCCCATTACCGCTATGGGATGA
GCCCCCCAGGCTCTGTTGCAGACAAGAGGAAGAACCCCCCATGGATCAGGCGGCGCCCAGTGGTTGTGGA
ACCCATCTCTGATGAAGACTGGTATCTGTTCTGTGGGGACACGGTGGAGATCCTAGAAGGCAAGGATGCC
GGGAAGCAGGGCAAAGTGGTTCAAGTTATCCGGCAGCGAAACTGGGTGGTCGTGGGAGGGCTGAACACAC
ATTACCGCTACATTGGCAAGACCATGGATTACCGGGGAACCATGATCCCTAGTGAAGCCCCCTTGCTCCA
CCGCCAGGTCAAACTTGTGGATCCTATGGACAGGAAACCCACTGAGATCGAGTGGAGATTTACTGAAGCA
GGAGAGCGGGTACGAGTCTCCACACGATCAGGGAGAATTATCCCTAAACCCGAATTTCCCAGAGCTGATG
GCATCGTCCCTGAAACGTGGATTGATGGCCCCAAAGACACATCAGTGGAAGATGCTTTAGAAAGAACCTA
TGTGCCCTGTCTAAAGACACTGCAGGAGGAGGTGATGGAGGCCATGGGGATCAAGGAGACCCGGAAATAC
AAGAAGGTCTATTGGTATTGA

Translation (216 aa):
MRLSALLALASKVTLPPHYRYGMSPPGSVADKRKNPPWIRRRPVVVEPISDEDWYLFCGDTVEILEGKDA
GKQGKVVQVIRQRNWVVVGGLNTHYRYIGKTMDYRGTMIPSEAPLLHRQVKLVDPMDRKPTEIEWRFTEA
GERVRVSTRSGRIIPKPEFPRADGIVPETWIDGPKDTSVEDALERTYVPCLKTLQEEVMEAMGIKETRKY
KKVYWY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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