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Report for CCDS12316.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12316.1 Public Homo sapiens 19 ZNF333 24 110 108 CCDS HistoryNCBI Gene:84449Re-query CCDS DB by CCDS ID:12316.1Re-query CCDS DB by GeneID:84449See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12316.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000292530.11 ENSP00000292530.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000292530.11Link to Ensembl Protein Viewer:ENSP00000292530.5Re-query CCDS DB by Nucleotide ID:ENST00000292530Re-query CCDS DB by Protein ID:ENSP00000292530
Original member Current member NCBI NM_032433.4 NP_115809.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032433.4Link to Protein Sequence:NP_115809.1Re-query CCDS DB by Nucleotide ID:NM_032433Re-query CCDS DB by Protein ID:NP_115809Link to BLAST:NP_115809.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115809.1 665 Q96JL9-1 665 100% 0 0

Chromosomal Locations for CCDS 12316.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 14693492 14693494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14695010 14695133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14695566 14695661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14699199 14699281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14705054 14705170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14706686 14706773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14715382 14715470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14716112 14716238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14716994 14717089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14717657 14717733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14718228 14719325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1998 nt):
ATGGAATCCGTCACCTTTGAGGATGTGGCCGTGGAGTTCATCCAGGAGTGGGCATTGCTGGACAGCGCAC
GGAGGAGCCTGTGCAAATACAGGATGCTTGACCAGTGCAGGACCCTGGCCTCCAGGGGAACTCCACCATG
CAAACCCAGTTGTGTCTCCCAGCTGGGGCAAAGAGCAGAGCCAAAGGCAACAGAACGAGGGATTCTCCGT
GCCACAGGTGTTGCCTGGGAATCTCAACTTAAACCCGAAGAGTTGCCTTCTATGCAGGATCTTTTGGAAG
AAGCATCCTCCAGGGACATGCAAATGGGGCCGGGGCTGTTCCTGAGGATGCAGCTGGTGCCCTCCATAGA
AGAGAGGGAGACACCATTGACTCGAGAGGACCGGCCAGCTCTCCAGGAGCCGCCTTGGTCTCTGGGATGC
ACGGGACTGAAGGCCGCTATGCAGATTCAGAGGGTGGTGATACCAGTGCCTACTCTGGGCCACCGCAACC
CATGGGTGGCCAGGGATTCTGCTGTGCCTGCACGTGACCCTGCCTGGCTTCAGGAGGACAAAGTGGAGGA
AGAAGCTATGGCTCCTGGGCTGCCAACCGCCTGTTCACAGGAACCAGTCACCTTTGCAGATGTGGCTGTG
GTGTTCACCCCAGAAGAATGGGTGTTTCTGGACTCTACTCAGAGGAGCCTGTATAGAGATGTGATGCTGG
AGAACTACAGGAACCTGGCCTCTGTGGCTGATCAACTGTGCAAACCCAATGCGTTGTCTTATTTGGAAGA
AAGAGGAGAGCAGTGGACCACTGACAGGGGCGTCCTCTCAGACACCTGTGCAGAACCTCAGTGTCAACCC
CAAGAGGCAATTCCTAGCCAAGATACTTTTACAGAGATCCTGTCCATTGATGTGAAAGGGGAGCAACCTC
AGCCTGGAGAAAAACTCTATAAATATAATGAACTTGAGAAACCTTTTAACAGCATTGAACCACTTTTCCA
GTACCAGAGAATTCATGCTGGAGAGGCATCCTGTGAATGTCAAGAGATTAGAAATTCCTTCTTCCAGAGT
GCCCACCTAATTGTGCCCGAGAAAATCCGTAGTGGGGATAAATCCTATGCATGTAACAAATGTGAAAAAT
CCTTCAGATACAGCTCTGACCTTATCAGGCATGAGAAGACTCATACTGCAGAGAAGTGCTTTGACTGTCA
AGAATGTGGGCAAGCCTTCAAATATTCCTCGAATCTCCGGCGACACATGAGAACCCATACCGGAGAGAAG
CCATTTGAATGTAGTCAGTGTGGGAAAACCTTCACGAGGAACTTTAACCTGATTTTGCACCAGAGAAACC
ACACAGGAGAGAAGCCCTACGAGTGTAAAGATTGTGGGAAAGCCTTCAATCAGCCATCATCCCTCAGGAG
CCACGTGAGAACTCACACTGGAGAGAAGCCCTTTGAATGCAGCCAGTGTGGGAAAGCCTTCAGGGAACAC
TCTTCACTGAAGACACATCTGCGAACCCATACCAGAGAGAAACCATATGAATGCAACCAGTGTGGCAAGC
CCTTCCGGACGAGCACTCATCTGAACGTGCACAAGAGGATACACACAGGGGAGAAACTGTATGAGTGCGC
GACTTGCGGTCAGGTCTTGAGTCGTCTTTCAACCCTGAAGAGTCACATGCGAACTCACACTGGAGAGAAG
CCCTATGTGTGCCAGGAATGTGGGCGAGCCTTCAGTGAGCCCTCATCCCTCAGGAAACATGCAAGGACTC
ACAGTGGCAAGAAGCCCTATGCATGCCAGGAATGCGGGCGAGCCTTTGGTCAGTCTTCACATCTTATTGT
ACATGTGAGAACACACAGTGCCGGGAGACCCTATCAATGTAATCAGTGTGAGAAAGCCTTCAGGCACAGC
TCCTCACTCACTGTACACAAAAGAACCCATGTGGGAAGAGAGACCATTAGGAATGGCAGCCTGCCTTTAT
CCATGTCTCATCCATACTGTGGGCCCCTTGCTAATTAA

Translation (665 aa):
MESVTFEDVAVEFIQEWALLDSARRSLCKYRMLDQCRTLASRGTPPCKPSCVSQLGQRAEPKATERGILR
ATGVAWESQLKPEELPSMQDLLEEASSRDMQMGPGLFLRMQLVPSIEERETPLTREDRPALQEPPWSLGC
TGLKAAMQIQRVVIPVPTLGHRNPWVARDSAVPARDPAWLQEDKVEEEAMAPGLPTACSQEPVTFADVAV
VFTPEEWVFLDSTQRSLYRDVMLENYRNLASVADQLCKPNALSYLEERGEQWTTDRGVLSDTCAEPQCQP
QEAIPSQDTFTEILSIDVKGEQPQPGEKLYKYNELEKPFNSIEPLFQYQRIHAGEASCECQEIRNSFFQS
AHLIVPEKIRSGDKSYACNKCEKSFRYSSDLIRHEKTHTAEKCFDCQECGQAFKYSSNLRRHMRTHTGEK
PFECSQCGKTFTRNFNLILHQRNHTGEKPYECKDCGKAFNQPSSLRSHVRTHTGEKPFECSQCGKAFREH
SSLKTHLRTHTREKPYECNQCGKPFRTSTHLNVHKRIHTGEKLYECATCGQVLSRLSTLKSHMRTHTGEK
PYVCQECGRAFSEPSSLRKHARTHSGKKPYACQECGRAFGQSSHLIVHVRTHSAGRPYQCNQCEKAFRHS
SSLTVHKRTHVGRETIRNGSLPLSMSHPYCGPLAN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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