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Report for CCDS13568.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
13568.1 |
Public |
Homo sapiens |
21 |
NRIP1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:8204](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:13568.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:8204](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 21 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 13568.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000318948.7 |
ENSP00000327213.4 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000318948.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000327213.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000318948](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000327213](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000400199.5 |
ENSP00000383060.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000400199.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000383060.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000400199](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000383060](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000400202.5 |
ENSP00000383063.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000400202.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000383063.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000400202](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000383063](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_003489.4 |
NP_003480.2 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_003489.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_003480.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_003489](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_003480](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_003480.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_003480.2 |
1158 |
P48552 |
1158 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 13568.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3477 nt): ATGACTCATGGAGAAGAGCTTGGCTCTGATGTGCACCAGGATTCTATTGTTTTAACTTACCTAGAAGGAT TACTAATGCATCAGGCAGCAGGGGGATCAGGTACTGCCGTTGACAAAAAGTCTGCTGGGCATAATGAAGA GGATCAGAACTTTAACATTTCTGGCAGTGCATTTCCCACCTGTCAAAGTAATGGTCCAGTTCTCAATACA CATACATATCAGGGGTCTGGCATGCTGCACCTCAAAAAAGCCAGACTGTTGCAGTCTTCTGAGGACTGGA ATGCAGCAAAGCGGAAGAGGCTGTCTGATTCTATCATGAATTTAAACGTAAAGAAGGAAGCTTTGCTAGC TGGCATGGTTGACAGTGTGCCTAAAGGCAAACAGGATAGCACATTACTGGCCTCTTTGCTTCAGTCATTC AGCTCTAGGCTGCAGACTGTTGCTCTGTCACAACAAATCAGGCAGAGCCTCAAGGAGCAAGGATATGCCC TCAGTCATGATTCTTTAAAAGTGGAGAAGGATTTAAGGTGCTATGGTGTTGCATCAAGTCACTTAAAAAC TTTGTTGAAGAAAAGTAAAGTTAAAGATCAAAAGCCTGATACGAATCTTCCTGATGTGACTAAAAACCTC ATCAGAGATAGGTTTGCAGAGTCTCCTCATCATGTTGGACAAAGTGGAACAAAGGTCATGAGTGAACCGT TGTCATGTGCTGCAAGATTACAGGCTGTTGCAAGCATGGTGGAAAAAAGGGCTAGTCCTGCCACCTCACC TAAACCTAGTGTTGCTTGTAGCCAGTTAGCATTACTTCTGTCAAGCGAAGCCCATTTGCAGCAGTATTCT CGAGAACACGCTTTAAAAACGCAAAATGCAAATCAAGCAGCAAGTGAAAGACTTGCTGCTATGGCCAGAT TGCAAGAAAATGGCCAGAAGGATGTTGGCAGTTACCAGCTCCCAAAAGGAATGTCAAGCCATCTTAATGG TCAGGCAAGAACATCATCAAGCAAACTGATGGCTAGCAAAAGTAGTGCTACAGTGTTTCAAAATCCAATG GGTATCATTCCTTCTTCCCCTAAAAATGCAGGTTATAAGAACTCACTGGAAAGAAACAATATAAAACAAG CTGCTAACAATAGTTTGCTTTTACATCTTCTTAAAAGCCAGACTATACCTAAGCCAATGAATGGACACAG TCACAGTGAGAGAGGAAGCATTTTTGAGGAAAGTAGTACACCTACAACTATTGATGAATATTCAGATAAC AATCCTAGTTTTACAGATGACAGCAGTGGTGATGAAAGTTCTTATTCCAACTGTGTTCCCATAGACTTGT CTTGCAAACACCGAACTGAAAAATCAGAATCTGACCAACCTGTTTCCCTGGATAACTTCACTCAATCCTT GCTAAACACTTGGGATCCAAAAGTCCCAGATGTAGATATCAAAGAAGATCAAGATACCTCAAAGAATTCT AAGCTAAACTCACACCAGAAAGTAACACTTCTTCAATTGCTACTTGGCCATAAGAATGAAGAAAATGTAG AAAAAAACACCAGCCCTCAGGGAGTACACAATGATGTGAGCAAGTTCAATACACAAAATTATGCAAGGAC TTCTGTGATAGAAAGCCCCAGTACAAATCGGACTACTCCAGTGAGCACTCCACCTTTACTTACATCAAGC AAAGCAGGGTCTCCCATCAATCTCTCTCAACACTCTCTGGTCATCAAATGGAATTCCCCACCATATGTCT GCAGTACTCAGTCTGAAAAGCTAACAAATACTGCATCTAACCACTCAATGGACCTTACAAAAAGCAAAGA CCCACCAGGAGAGAAACCAGCCCAAAATGAAGGTGCACAGAACTCTGCAACGTTTAGTGCCAGTAAGCTG TTACAAAATTTAGCACAATGTGGAATGCAGTCATCCATGTCAGTGGAAGAGCAGAGACCCAGCAAACAGC TGTTAACTGGAAACACAGATAAACCGATAGGTATGATTGATAGATTAAATAGCCCTTTGCTCTCAAATAA AACAAATGCAGTTGAAGAAAATAAAGCATTTAGTAGTCAACCAACAGGTCCTGAACCAGGGCTTTCTGGT TCTGAAATAGAAAATCTGCTTGAAAGACGTACTGTCCTCCAGTTGCTCCTGGGGAACCCCAACAAAGGGA AGAGTGAAAAAAAAGAGAAAACTCCCTTAAGAGATGAAAGTACTCAGGAACACTCAGAGAGAGCTTTAAG TGAACAAATACTGATGGTGAAAATAAAATCTGAGCCTTGTGATGACTTACAAATTCCTAACACAAATGTG CACTTGAGCCATGATGCTAAGAGTGCCCCATTCTTGGGTATGGCTCCTGCTGTGCAGAGAAGCGCACCTG CCTTACCAGTGTCCGAAGACTTTAAATCGGAGCCTGTTTCACCTCAGGATTTTTCTTTCTCCAAGAATGG TCTGCTAAGTCGATTGCTAAGACAAAATCAAGATAGTTACCTGGCAGATGATTCAGACAGGAGTCACAGA AATAATGAAATGGCACTTCTAGAATCAAAGAATCTTTGCATGGTCCCTAAGAAAAGGAAGCTTTATACTG AGCCATTAGAAAATCCATTTAAAAAGATGAAAAACAACATTGTTGATGCTGCAAACAATCACAGTGCCCC AGAAGTACTGTATGGGTCCTTGCTTAACCAGGAAGAGCTGAAATTTAGCAGAAATGATCTTGAATTTAAA TATCCTGCTGGTCATGGCTCAGCCAGCGAAAGTGAACACAGGAGTTGGGCCAGAGAGAGCAAAAGCTTTA ATGTTCTGAAACAGCTGCTTCTCTCAGAAAACTGTGTGCGAGATTTGTCCCCGCACAGAAGTAACTCTGT GGCTGACAGTAAAAAGAAAGGACACAAAAATAATGTGACCAACAGCAAACCTGAATTTAGCATTTCTTCT TTAAATGGACTGATGTACAGTTCCACTCAGCCCAGCAGTTGCATGGATAACAGGACATTTTCATACCCAG GTGTAGTAAAAACTCCTGTGAGTCCTACTTTCCCTGAGCACTTGGGCTGTGCAGGGTCTAGACCAGAATC TGGGCTTTTGAATGGGTGTTCCATGCCCAGTGAGAAAGGACCCATTAAGTGGGTTATCACTGATGCGGAG AAGAATGAGTATGAAAAAGACTCTCCAAGATTGACCAAAACCAACCCAATACTATATTACATGCTTCAAA AAGGAGGCAATTCTGTTACCAGTCGAGAAACACAAGACAAGGACATTTGGAGGGAGGCTTCATCTGCTGA AAGTGTCTCACAGGTCACAGCCAAAGAAGAGTTACTTCCTACTGCAGAAACGAAAGCTTCTTTCTTTAAT TTAAGAAGCCCTTACAATAGCCATATGGGAAATAATGCTTCTCGCCCACACAGCGCAAATGGAGAAGTTT ATGGACTTCTGGGAAGCGTGCTAACGATAAAGAAAGAATCAGAATAA
Translation (1158 aa): MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISGSAFPTCQSNGPVLNT HTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEALLAGMVDSVPKGKQDSTLLASLLQSF SSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDLRCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNL IRDRFAESPHHVGQSGTKVMSEPLSCAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYS REHALKTQNANQAASERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPM GIIPSSPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTIDEYSDN NPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKVPDVDIKEDQDTSKNS KLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYARTSVIESPSTNRTTPVSTPPLLTSS KAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTASNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKL LQNLAQCGMQSSMSVEEQRPSKQLLTGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSG SEIENLLERRTVLQLLLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNV HLSHDAKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDSDRSHR NNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLLNQEELKFSRNDLEFK YPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSNSVADSKKKGHKNNVTNSKPEFSISS LNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFPEHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAE KNEYEKDSPRLTKTNPILYYMLQKGGNSVTSRETQDKDIWREASSAESVSQVTAKEELLPTAETKASFFN LRSPYNSHMGNNASRPHSANGEVYGLLGSVLTIKKESE
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