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Report for CCDS1361.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1361.1 Public Homo sapiens 1 TSEN15 24 110 108 CCDS HistoryNCBI Gene:116461Re-query CCDS DB by CCDS ID:1361.1Re-query CCDS DB by GeneID:116461See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1361.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000645668.2 ENSP00000493902.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000645668.2Link to Ensembl Protein Viewer:ENSP00000493902.2Re-query CCDS DB by Nucleotide ID:ENST00000645668Re-query CCDS DB by Protein ID:ENSP00000493902
Original member Current member NCBI NM_052965.4 NP_443197.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_052965.4Link to Protein Sequence:NP_443197.1Re-query CCDS DB by Nucleotide ID:NM_052965Re-query CCDS DB by Protein ID:NP_443197Link to BLAST:NP_443197.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_443197.1 171 Q8WW01-1 171 100% 0 0

Chromosomal Locations for CCDS 1361.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 184051756 184051890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184054354 184054435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184054728 184054863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184072157 184072298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 184072827 184072847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (516 nt):
ATGGAGGAGCGCGGCGATTCCGAGCCGACCCCCGGCTGCAGCGGCCTGGGTCCGGGCGGTGTTCGCGGCT
TT
GGCGACGGCGGTGGAGCTCCTTCGTGGGCCCCTGAGGACGCCTGGATGGGCACTCACCCTAAGTATCT
A
GAAATGATGGAATTAGATATAGGAGATGCCACCCAAGTTTATGTAGCGTTCTTGGTTTACCTGGACCTC
ATG
GAAAGCAAAAGCTGGCATGAAGTAAACTGTGTAGGATTACCAGAACTCCAGCTCATCTGCCTTGTTG
GT
ACTGAGATAGAAGGGGAGGGGTTACAGACTGTGGTGCCTACCCCCATCACTGCTTCCCTCAGCCATAA
C
AGGATAAGGGAGATCTTGAAGGCATCTCGAAAGTTGCAAGGTGATCCAGATTTGCCGATGTCTTTTACT
TTG
GCCATAGTGGAGTCTGATTCTACAATAGTCTATTATAAACTTACTGATGGATTTATGCTGCCAGACC
CT
CAGAATATTTCTCTTAGAAGATGA


Translation (171 aa):
MEERGDSEPTPGCSGLGPGGVRGFGDGGGAPSWAPEDAWMGTHPKYLEMMELDIGDATQVYVAFLVYLDL
M
E
SKSWHEVNCVGLPELQLICLVGTEIEGEGLQTVVPTPITASLSHNRIREILKASRKLQGDPDLPMSFT
L
AIVESDSTIVYYKLTDGFMLPDPQ
NISLRR



Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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