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Report for CCDS13811.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13811.1 Public Homo sapiens 22 RGL4 24 110 108 CCDS HistoryNCBI Gene:266747Re-query CCDS DB by CCDS ID:13811.1Re-query CCDS DB by GeneID:266747See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13811.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000290691.10 ENSP00000290691.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000290691.10Link to Ensembl Protein Viewer:ENSP00000290691.5Re-query CCDS DB by Nucleotide ID:ENST00000290691Re-query CCDS DB by Protein ID:ENSP00000290691
Original member Current member NCBI NM_153615.2 NP_705843.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153615.2Link to Protein Sequence:NP_705843.1Re-query CCDS DB by Nucleotide ID:NM_153615Re-query CCDS DB by Protein ID:NP_705843Link to BLAST:NP_705843.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_705843.1 473 Q8IZJ4-1 473 100% 0 0

Chromosomal Locations for CCDS 13811.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 23692031 23692209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 23692335 23692528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 23692669 23692991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 23693759 23693974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 23694347 23694450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 23694950 23695019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 23696614 23696688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 23697171 23697245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 23697838 23697861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 23698212 23698333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 23698844 23698883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1422 nt):
ATGAGGAAGCTGCTCACAAATCTGCCTGCAGCTGCAGTCTTGAGTGCCCAGGTGTACAGTGCTGTGCTCC
AGGGCCTTTGGGAAGAGAATGTCTGTGGGACGCCAGGGCGCACGAGGGTCTGTACAGCCCTGCTGTATGG
CCAGGTCTGCCCCTTCCAGGACAGCACTGATGGCTTACGCACCATCACCTCCATTTTGTTCAACTGGCCC
CCCGAAAACACTTCAGTTTACTATCAGCCCCCGCAACGGTCATCTTTCCGGATAAAGCTGGCCTTCAGGA
ACCTCTCCTGGCCTGGACTGGGCTTGGAGGACCATCAGGAAATTGTCCTAGGCCAGTTGGTGCTTCCGGA
GCCCAACGAGGCCAAGCCAGATGATCCTGCTCCACGTCCTGGGCAACACGCATTAACAATGCCGGCCCTG
GAGCCAGCACCACCACTGCTGGCGGACCTGGGGCCTGCTCTGGAGCCAGAGTCACCTGCAGCCCTGGGTC
CACCAGGATATCTACATTCAGCACCAGGGCCAGCACCAGCACCAGGGGAAGGGCCCCCTCCAGGGACAGT
GCTGGAGCCACAGTCAGCCCCAGAGTCCTCCTGTCCCTGTCGTGGGTCTGTAAAGAACCAACCCAGTGAG
GAGCTGCCTGACATGACGACCTTCCCTCCCAGGCTGCTGGCAGAGCAGCTGACCCTCATGGATGCGGAGC
TGTTCAAGAAGGTGGTGCTCCACGAATGCTTGGGCTGCATCTGGGGCCAAGGACATCTGAAGGGGAATGA
GCACATGGCACCCACAGTTCGTGCCACCATCGCACACTTCAACAGGCTCACCAACTGCATCACCACCTCC
TGCCTCGGGGACCACAGCATGAGGGCCCGGGACAGGGCCAGGGTGGTGGAGCACTGGATCAAGGTGGCCA
GGGAGTGCCTAAGCCTCAACAACTTCTCCTCGGTGCACGTCATCGTCTCTGCTCTGTGCAGCAACCCAAT
AGGTCAGCTACACAAGACGTGGGCAGGAGTGTCCAGCAAAAGCATGAAAGAGCTAAAAGAACTCTGCAAA
AAAGACACTGCAGTGAAGAGGGACCTACTGATCAAGGCGGGGAGCTTTAAGGTGGCCACCCAGGAGAGGA
ACCCCCAGAGAGTCCAGATGAGGCTGCGGAGGCAGAAGAAGGGTGTGGTCCCCTTCCTGGGGGATTTTCT
GACTGAGTTACAGAGGCTGGATTCGGCCATCCCGGACGACCTGGATGGCAACACCAACAAGAGGAGCAAG
GAGGTCCGAGTTCTGCAGGAAATGCAGCTGCTCCAAGTGGCTGCCATGAATTACAGGCTTCGGCCTCTTG
AGAAATTTGTCACCTATTTCACAAGAATGGAGCAGCTCAGTGACAAAGAGAGCTACAAGCTGTCCTGCCA
GCTGGAGCCCGAAAACCCGTAG

Translation (473 aa):
MRKLLTNLPAAAVLSAQVYSAVLQGLWEENVCGTPGRTRVCTALLYGQVCPFQDSTDGLRTITSILFNWP
PENTSVYYQPPQRSSFRIKLAFRNLSWPGLGLEDHQEIVLGQLVLPEPNEAKPDDPAPRPGQHALTMPAL
EPAPPLLADLGPALEPESPAALGPPGYLHSAPGPAPAPGEGPPPGTVLEPQSAPESSCPCRGSVKNQPSE
ELPDMTTFPPRLLAEQLTLMDAELFKKVVLHECLGCIWGQGHLKGNEHMAPTVRATIAHFNRLTNCITTS
CLGDHSMRARDRARVVEHWIKVARECLSLNNFSSVHVIVSALCSNPIGQLHKTWAGVSSKSMKELKELCK
KDTAVKRDLLIKAGSFKVATQERNPQRVQMRLRRQKKGVVPFLGDFLTELQRLDSAIPDDLDGNTNKRSK
EVRVLQEMQLLQVAAMNYRLRPLEKFVTYFTRMEQLSDKESYKLSCQLEPENP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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