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Report for CCDS14349.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14349.1 Public Homo sapiens X GPR173 24 110 108 CCDS HistoryNCBI Gene:54328Re-query CCDS DB by CCDS ID:14349.1Re-query CCDS DB by GeneID:54328See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14349.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000332582.5 ENSP00000331600.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000332582.5Link to Ensembl Protein Viewer:ENSP00000331600.5Re-query CCDS DB by Nucleotide ID:ENST00000332582Re-query CCDS DB by Protein ID:ENSP00000331600
Original member Current member NCBI NM_018969.6 NP_061842.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018969.6Link to Protein Sequence:NP_061842.1Re-query CCDS DB by Nucleotide ID:NM_018969Re-query CCDS DB by Protein ID:NP_061842Link to BLAST:NP_061842.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061842.1 373 Q9NS66 373 100% 0 0

Chromosomal Locations for CCDS 14349.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 53076622 53077743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1122 nt):
ATGGCCAACACTACCGGAGAGCCTGAGGAGGTGAGCGGCGCTCTGTCCCCACCGTCCGCATCAGCTTATG
TGAAGCTGGTACTGCTGGGACTGATTATGTGCGTGAGCCTGGCGGGTAACGCCATCTTGTCCCTGCTGGT
GCTCAAGGAGCGTGCCCTGCACAAGGCTCCTTACTACTTCCTGCTGGACCTGTGCCTGGCCGATGGCATA
CGCTCTGCCGTCTGCTTCCCCTTTGTGCTGGCTTCTGTGCGCCACGGCTCTTCATGGACCTTCAGTGCAC
TCAGCTGCAAGATTGTGGCCTTTATGGCCGTGCTCTTTTGCTTCCATGCGGCCTTCATGCTGTTCTGCAT
CAGCGTCACCCGCTACATGGCCATCGCCCACCACCGCTTCTACGCCAAGCGCATGACACTCTGGACATGC
GCGGCTGTCATCTGCATGGCCTGGACCCTGTCTGTGGCCATGGCCTTCCCACCTGTCTTTGACGTGGGCA
CCTACAAGTTTATTCGGGAGGAGGACCAGTGCATCTTTGAGCATCGCTACTTCAAGGCCAATGACACGCT
GGGCTTCATGCTTATGTTGGCTGTGCTCATGGCAGCTACCCATGCTGTCTACGGCAAGCTGCTCCTCTTC
GAGTATCGTCACCGCAAGATGAAGCCAGTGCAGATGGTGCCAGCCATCAGCCAGAACTGGACATTCCATG
GTCCCGGGGCCACCGGCCAGGCTGCTGCCAACTGGATCGCCGGCTTTGGCCGTGGGCCCATGCCACCAAC
CCTGCTGGGTATCCGGCAGAATGGGCATGCAGCCAGCCGGCGGCTACTGGGCATGGACGAGGTCAAGGGT
GAAAAGCAGCTGGGCCGCATGTTCTACGCGATCACACTGCTCTTTCTGCTCCTCTGGTCACCCTACATCG
TGGCCTGCTACTGGCGAGTGTTTGTGAAAGCCTGTGCTGTGCCCCACCGCTACCTGGCCACTGCTGTTTG
GATGAGCTTCGCCCAGGCTGCCGTCAACCCAATTGTCTGCTTCCTGCTCAACAAGGACCTCAAGAAGTGC
CTGAGGACTCACGCCCCCTGCTGGGGCACAGGAGGTGCCCCGGCTCCCAGAGAACCCTACTGTGTCATGT
GA

Translation (373 aa):
MANTTGEPEEVSGALSPPSASAYVKLVLLGLIMCVSLAGNAILSLLVLKERALHKAPYYFLLDLCLADGI
RSAVCFPFVLASVRHGSSWTFSALSCKIVAFMAVLFCFHAAFMLFCISVTRYMAIAHHRFYAKRMTLWTC
AAVICMAWTLSVAMAFPPVFDVGTYKFIREEDQCIFEHRYFKANDTLGFMLMLAVLMAATHAVYGKLLLF
EYRHRKMKPVQMVPAISQNWTFHGPGATGQAAANWIAGFGRGPMPPTLLGIRQNGHAASRRLLGMDEVKG
EKQLGRMFYAITLLFLLLWSPYIVACYWRVFVKACAVPHRYLATAVWMSFAQAAVNPIVCFLLNKDLKKC
LRTHAPCWGTGGAPAPREPYCVM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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