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Report for CCDS14419.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14419.1 Public Homo sapiens X CITED1 24 110 108 CCDS HistoryNCBI Gene:4435Re-query CCDS DB by CCDS ID:14419.1Re-query CCDS DB by GeneID:4435See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14419.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000246139.9 ENSP00000246139.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000246139.9Link to Ensembl Protein Viewer:ENSP00000246139.5Re-query CCDS DB by Nucleotide ID:ENST00000246139Re-query CCDS DB by Protein ID:ENSP00000246139
Original member Current member EBI ENST00000373619.7 ENSP00000362721.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373619.7Link to Ensembl Protein Viewer:ENSP00000362721.3Re-query CCDS DB by Nucleotide ID:ENST00000373619Re-query CCDS DB by Protein ID:ENSP00000362721
Original member Current member EBI ENST00000445983.5 ENSP00000403274.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000445983.5Link to Ensembl Protein Viewer:ENSP00000403274.1Re-query CCDS DB by Nucleotide ID:ENST00000445983Re-query CCDS DB by Protein ID:ENSP00000403274
Original member Current member EBI ENST00000651998.1 ENSP00000499148.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000651998.1Link to Ensembl Protein Viewer:ENSP00000499148.1Re-query CCDS DB by Nucleotide ID:ENST00000651998Re-query CCDS DB by Protein ID:ENSP00000499148
Original member Current member NCBI NM_001144886.2 NP_001138358.1 Accepted alive Link to Nucleotide Sequence:NM_001144886.2Link to Protein Sequence:NP_001138358.1Re-query CCDS DB by Nucleotide ID:NM_001144886Re-query CCDS DB by Protein ID:NP_001138358Link to BLAST:NP_001138358.1
Original member Current member NCBI NM_001144887.2 NP_001138359.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001144887.2Link to Protein Sequence:NP_001138359.1Re-query CCDS DB by Nucleotide ID:NM_001144887Re-query CCDS DB by Protein ID:NP_001138359Link to BLAST:NP_001138359.1
Original member Current member NCBI NM_004143.4 NP_004134.2 Accepted alive Link to Nucleotide Sequence:NM_004143.4Link to Protein Sequence:NP_004134.2Re-query CCDS DB by Nucleotide ID:NM_004143Re-query CCDS DB by Protein ID:NP_004134Link to BLAST:NP_004134.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138358.1 193 Q99966-1 193 100% 0 0
NP_001138359.1 193 Q99966-1 193 100% 0 0
NP_004134.2 193 Q99966-1 193 100% 0 0

Chromosomal Locations for CCDS 14419.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 72301723 72302244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 72302810 72302869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (582 nt):
ATGCCAACAACGTCGAGGCCTGCACTTGATGTCAAGGGTGGCACCTCACCTGCGAAGGAGGATGCCAACC
AAGAGATGAGCTCCGTGGCCTACTCCAACCTTGCGGTGAAAGATCGCAAAGCAGTGGCCATTCTGCACTA
CCCTGGGGTAGCCTCAAATGGAACCAAGGCCAGTGGGGCTCCCACTAGTTCCTCGGGATCTCCAATAGGC
TCTCCTACAACCACCCCTCCCACTAAACCCCCATCCTTCAACCTGCACCCCGCCCCTCACTTGCTGGCTA
GTATGCACCTGCAGAAACTTAATAGCCAGTATCAGGGGATGGCTGCTGCCACTCCAGGCCAACCCGGGGA
GGCAGGACCCCTGCAAAACTGGGACTTTGGGGCCCAGGCGGGAGGGGCAGAATCACTCTCTCCTTCTGCT
GGTGCCCAGAGCCCTGCTATCATCGATTCGGACCCAGTGGATGAGGAAGTGCTGATGTCGCTGGTGGTGG
AACTGGGGTTGGACCGAGCCAATGAGCTTCCGGAGCTGTGGCTGGGGCAGAATGAGTTTGACTTCACTGC
GGACTTTCCATCTAGCTGCTAA

Translation (193 aa):
MPTTSRPALDVKGGTSPAKEDANQEMSSVAYSNLAVKDRKAVAILHYPGVASNGTKASGAPTSSSGSPIG
SPTTTPPTKPPSFNLHPAPHLLASMHLQKLNSQYQGMAAATPGQPGEAGPLQNWDFGAQAGGAESLSPSA
GAQSPAIIDSDPVDEEVLMSLVVELGLDRANELPELWLGQNEFDFTADFPSSC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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