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Report for CCDS14522.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14522.1 Public Homo sapiens X TBC1D8B 24 110 108 CCDS HistoryNCBI Gene:54885Re-query CCDS DB by CCDS ID:14522.1Re-query CCDS DB by GeneID:54885See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14522.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357242.10 ENSP00000349781.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357242.10Link to Ensembl Protein Viewer:ENSP00000349781.5Re-query CCDS DB by Nucleotide ID:ENST00000357242Re-query CCDS DB by Protein ID:ENSP00000349781
Original member Current member NCBI NM_017752.3 NP_060222.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017752.3Link to Protein Sequence:NP_060222.2Re-query CCDS DB by Nucleotide ID:NM_017752Re-query CCDS DB by Protein ID:NP_060222Link to BLAST:NP_060222.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060222.2 1120 Q0IIM8-1 1120 100% 0 0

Chromosomal Locations for CCDS 14522.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 106802854 106802983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106818663 106818773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106820877 106820995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106821977 106822202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106823226 106823466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106826030 106826237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106827170 106827337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106839308 106839457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106840048 106840198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106840670 106840884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106848186 106848303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106850025 106850310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106853521 106853650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106854198 106854296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106865559 106865627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106865793 106866033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106866797 106866862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106868393 106868476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106869485 106869541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106870716 106870813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106873570 106873965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3363 nt):
ATGTGGCTGAAGCCTGAGGAAGTGCTTCTGAAAAATGCGCTGAAGCTGTGGCTGATGGAAAGGTCCAACG
ACTACTTCGTGCTGCAGCGGCGTCGGGGCTACGGGGAGGAAGGCGGAGGGGGGCTCACAGGGCTTCTGGT
TGGGACTCTTGATTCAGTCTTGGACTCTACTGCTAAAGTAGCTCCATTTCGCATCCTACACCAGACACCA
GATTCTCAAGTTTACTTGTCAATTGCATGTGGAGCCAACAGAGAAGAAATAACCAAGCATTGGGATTGGT
TGGAACAAAATATTATGAAGACCTTATCTGTATTTGATTCAAATGAAGATATTACTAATTTTGTACAAGG
AAAAATAAGAGGATTAATTGCTGAAGAGGGAAAACATTGTTTTGCAAAAGAAGATGATCCTGAGAAATTT
CGAGAAGCCCTTTTGAAATTTGAAAAATGTTTTGGTTTACCAGAGAAGGAGAAGTTAGTGACCTATTATT
CATGCAGTTATTGGAAAGGACGGGTTCCTTGTCAGGGTTGGCTTTATCTTAGCACCAACTTTCTGAGCTT
CTATTCTTTTTTGTTGGGATCAGAAATAAAACTCATTATCTCCTGGGATGAAGTCTCAAAACTTGAAAAG
ACTTCAAATGTCATACTGACAGAGAGTATTCACGTGTGTTCCCAAGGAGAGAATCACTACTTTTCAATGT
TTTTGCACATTAACCAAACATACCTTCTTATGGAACAGCTGGCAAACTATGCCATTAGAAGACTTTTTGA
TAAGGAAACATTTGATAATGACCCAGTCCTTTATAATCCTCTACAGATCACCAAAAGAGGTCTGGAAAAT
AGAGCCCACAGTGAGCAATTTAATGCCTTTTTTAGGCTGCCCAAAGGAGAGAGTTTGAAAGAAGTACATG
AATGTTTCTTATGGGTACCATTCAGCCACTTCAATACTCATGGGAAAATGTGCATCTCAGAAAATTATAT
CTGCTTTGCTAGCCAAGATGGCAATCAGTGTAGTGTAATCATTCCACTACGAGAGGTCTTAGCTATAGAT
AAGACAAATGATTCCAGCAAATCTGTCATCATTAGCATCAAAGGAAAAACAGCTTTTCGCTTCCATGAAG
TTAAAGACTTTGAACAACTGGTAGCAAAACTCAGGCTCAGATGCGGAGCAGCTTCAACTCAATATCATGA
TATTAGCACAGAGCTTGCTATTAGTTCTGAGTCTACAGAGCCATCTGATAATTTTGAGGTGCAATCTTTG
ACAAGTCAGAGGGAATGCAGTAAAACTGTGAACACTGAAGCCTTAATGACAGTATTTCACCCTCAGAATT
TGGAGACTCTTAATTCTAAAATGTTGAAAGAAAAAATGAAGGAACAGTCATGGAAAATACTGTTTGCAGA
ATGTGGACGTGGTGTTAGTATGTTTCGAACCAAAAAGACTCGAGATCTTGTTGTAAGAGGGATTCCAGAA
ACATTAAGAGGAGAACTCTGGATGCTTTTTTCAGGTGCTGTTAATGACATGGCTACTAATCCTGACTATT
ATACTGAAGTGGTTGAGCAGTCCTTAGGGACCTGCAACTTGGCTACTGAAGAAATTGAACGTGATTTACG
TCGCTCTCTGCCTGAGCACCCAGCCTTTCAGAGTGATACTGGCATATCTGCTCTGAGAAGGGTACTCACA
GCTTATGCATACAGGAATCCCAAAATTGGATACTGCCAGGCAATGAATATTTTGACTTCAGTGCTGCTTC
TATATGCAAAAGAGGAAGAAGCTTTTTGGCTTCTGGTTGCTGTATGTGAACGAATGTTGCCTGATTATTT
TAATCGTCGAATTATTGGTGCCTTGGTGGATCAGGCAGTCTTTGAAGAACTTATCAGGGATCACCTTCCT
CAGCTGACAGAACACATGACTGATATGACATTCTTTTCCTCAGTTTCTCTCTCTTGGTTTCTCACACTTT
TTATTAGTGTGCTACCTATTGAAAGTGCAGTGAATGTGGTGGACTGTTTCTTCTATGATGGAATAAAGGC
CATTTTGCAACTGGGATTGGCAATACTTGACTATAATTTAGACAAACTGCTGACTTGTAAAGATGATGCT
GAAGCTGTGACAGCCTTAAACAGGTTCTTTGACAATGTCACTAATAAGGATAGTCCATTGCCTTCAAATG
TTCAGCAAGGTTCAAATGTGAGTGATGAAAAAACCAGTCATACTAGAGTGGATATTACAGATTTGATTAG
AGAATCAAATGAGAAATATGGTAATATTCGCTATGAAGATATACATAGTATGCGCTGTCGAAATAGGTTG
TATGTGATACAGACCCTAGAGGAAACAACAAAACAGAATGTGTTGCGTGTTGTATCACAAGATGTGAAAT
TGAGCCTTCAAGAATTGGATGAACTTTATGTCATCTTTAAGAAAGAGCTGTTTTTATCTTGTTATTGGTG
TTTGGGTTGCCCAGTATTGAAGCATCATGACCCCAGTCTGCCATATTTGGAACAGTATCAGATTGACTGC
CAGCAGTTCAGAGCGTTGTATCACTTGTTGAGTCCCTGGGCTCATTCTGCAAATAAAGACTCACTAGCTT
TATGGACATTCAGATTGTTAGATGAAAACTCTGATTGCCTTATAAACTTCAAAGAATTCTCCTCTGCAAT
TGACATAATGTACAATGGAAGTTTTACTGAGAAGCTTAAGCTGCTTTTTAAGCTACATATTCCTCCAGCT
TACACTGAAGTGAAATCTAAGGATGCTTCAAAAGGAGATGAACTTTCCAAGGAAGAATTACTTTATTTCA
GTCAGCTGCATGTTTCCAAGCCTGCAAATGAGAAGGAAGCAGAATCAGCAAAACACAGCCCTGAAAAAGG
CAAAGGGAAAATTGATATTCAAGCATATCTAAGTCAATGGCAAGATGAGCTTTTCAAAAAAGAAGAAAAC
ATTAAGGATTTACCAAGAATGAATCAGTCTCAGTTTATTCAGTTTTCAAAGACCCTCTATAACTTATTTC
ATGAGGACCCTGAAGAAGAATCATTATATCAAGCCATTGCTGTTGTAACCAGCCTTTTACTCAGGATGGA
AGAAGTTGGAAGGAAACTACATAGCCCTACATCATCAGCCAAAGGATTCTCTGGTACTGTCTGTGGTTCT
GGAGGACCCAGTGAGGAAAAAACAGGGAGCCACTTGGAGAAAGATCCTTGTTCCTTTAGGGAGGAACCTC
AGTGGTCATTTGCATTTGAACAGATTCTTGCATCGCTGTTGAATGAACCAGCATTGGTGAGGTTTTTTGA
GAAACCCATAGATGTAAAAGCCAAGCTGGAAAATGCAAGAATTTCTCAGTTAAGGTCTAGAACCAAGATG
TAA

Translation (1120 aa):
MWLKPEEVLLKNALKLWLMERSNDYFVLQRRRGYGEEGGGGLTGLLVGTLDSVLDSTAKVAPFRILHQTP
DSQVYLSIACGANREEITKHWDWLEQNIMKTLSVFDSNEDITNFVQGKIRGLIAEEGKHCFAKEDDPEKF
REALLKFEKCFGLPEKEKLVTYYSCSYWKGRVPCQGWLYLSTNFLSFYSFLLGSEIKLIISWDEVSKLEK
TSNVILTESIHVCSQGENHYFSMFLHINQTYLLMEQLANYAIRRLFDKETFDNDPVLYNPLQITKRGLEN
RAHSEQFNAFFRLPKGESLKEVHECFLWVPFSHFNTHGKMCISENYICFASQDGNQCSVIIPLREVLAID
KTNDSSKSVIISIKGKTAFRFHEVKDFEQLVAKLRLRCGAASTQYHDISTELAISSESTEPSDNFEVQSL
TSQRECSKTVNTEALMTVFHPQNLETLNSKMLKEKMKEQSWKILFAECGRGVSMFRTKKTRDLVVRGIPE
TLRGELWMLFSGAVNDMATNPDYYTEVVEQSLGTCNLATEEIERDLRRSLPEHPAFQSDTGISALRRVLT
AYAYRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVAVCERMLPDYFNRRIIGALVDQAVFEELIRDHLP
QLTEHMTDMTFFSSVSLSWFLTLFISVLPIESAVNVVDCFFYDGIKAILQLGLAILDYNLDKLLTCKDDA
EAVTALNRFFDNVTNKDSPLPSNVQQGSNVSDEKTSHTRVDITDLIRESNEKYGNIRYEDIHSMRCRNRL
YVIQTLEETTKQNVLRVVSQDVKLSLQELDELYVIFKKELFLSCYWCLGCPVLKHHDPSLPYLEQYQIDC
QQFRALYHLLSPWAHSANKDSLALWTFRLLDENSDCLINFKEFSSAIDIMYNGSFTEKLKLLFKLHIPPA
YTEVKSKDASKGDELSKEELLYFSQLHVSKPANEKEAESAKHSPEKGKGKIDIQAYLSQWQDELFKKEEN
IKDLPRMNQSQFIQFSKTLYNLFHEDPEEESLYQAIAVVTSLLLRMEEVGRKLHSPTSSAKGFSGTVCGS
GGPSEEKTGSHLEKDPCSFREEPQWSFAFEQILASLLNEPALVRFFEKPIDVKAKLENARISQLRSRTKM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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