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Report for CCDS14583.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14583.1 Public Homo sapiens X SEPTIN6 24 110 108 CCDS HistoryNCBI Gene:23157Re-query CCDS DB by CCDS ID:14583.1Re-query CCDS DB by GeneID:23157See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14583.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354228.8 ENSP00000346169.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000354228.8Link to Ensembl Protein Viewer:ENSP00000346169.4Re-query CCDS DB by Nucleotide ID:ENST00000354228Re-query CCDS DB by Protein ID:ENSP00000346169
Original member Current member NCBI NM_145802.4 NP_665801.1 Accepted alive Link to Nucleotide Sequence:NM_145802.4Link to Protein Sequence:NP_665801.1Re-query CCDS DB by Nucleotide ID:NM_145802Re-query CCDS DB by Protein ID:NP_665801Link to BLAST:NP_665801.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_665801.1 429 Q14141-4 429 100% 0 0

Chromosomal Locations for CCDS 14583.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 119616733 119616742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119629318 119629508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119633360 119633492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119637027 119637195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119640692 119640788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119649937 119650098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119652854 119653040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119663482 119663677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119675554 119675668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119693076 119693105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1290 nt):
ATGGCAGCGACCGATATAGCTCGCCAGGTGGGTGAAGGTTGCCGAACTGTCCCCCTGGCTGGACATGTGG
GG
TTTGACAGCTTGCCTGACCAGCTGGTGAATAAGTCCGTCAGCCAGGGCTTCTGCTTCAACATCCTGTG
C
GTGGGAGAGACAGGTTTGGGCAAGTCCACCCTCATGGACACCCTGTTCAACACCAAATTCGAAGGGGAG
CCA
GCCACCCACACACAGCCGGGTGTCCAGCTCCAGTCTAATACCTATGACCTCCAAGAGAGCAACGTGA
GG
CTAAAGCTCACGATCGTTAGCACAGTTGGCTTTGGGGACCAGATCAACAAAGAGGACAGCTACAAGCC
T
ATCGTGGAATTCATCGATGCACAATTCGAGGCCTACCTGCAGGAAGAGCTAAAGATCCGAAGAGTGCTA
CAC
ACCTACCATGACTCCCGAATCCATGTCTGCTTGTATTTCATTGCCCCCACGGGTCATTCCCTGAAGT
CT
CTGGACCTAGTGACTATGAAGAAGCTGGACAGTAAGGTGAACATCATCCCCATCATTGCCAAAGCAGA
T
GCCATTTCGAAGAGTGAGCTAACAAAGTTCAAAATCAAAATCACCAGCGAGCTTGTCAGCAACGGAGTC
CAG
ATCTATCAGTTTCCTACAGATGATGAGTCGGTGGCAGAGATCAATGGAACCATGAACGCCCACCTGC
CG
TTTGCTGTCATTGGCAGCACAGAAGAACTGAAGATAGGCAACAAGATGATGAGGGCGCGGCAGTATCC
T
TGGGGCACTGTGCAGGTTGAAAACGAGGCCCACTGCGACTTTGTGAAGCTGCGGGAGATGCTGATTCGG
GTC
AACATGGAGGATCTGCGGGAGCAGACCCACACCCGGCACTATGAGCTGTATCGCCGCTGTAAGCTGG
AG
GAGATGGGCTTCAAGGACACCGACCCTGACAGCAAACCCTTCAGTTTACAGGAGACATATGAGGCCAA
A
AGGAACGAGTTCCTAGGGGAACTCCAGAAAAAAGAAGAGGAGATGAGACAGATGTTCGTCCAGCGAGTC
AAA
GAGAAAGAAGCGGAGCTCAAAGAGGCAGAGAAAGAGCTGCACGAGAAGTTTGACCGTCTGAAGAAAC
TG
CACCAGGACGAGAAGAAGAAACTGGAGGATAAGAAGAAATCCCTGGATGATGAAGTGAATGCTTTCAA
G
CAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCCCAGGGCTCCCAGGCTGGAGGCTCACAGACTCTGAAG
AGA
GACAAAGAGAAGAAAAACTTTTTTTAA


Translation (429 aa):
MAATDIARQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKFEGE
P
ATHTQPGVQLQSNTYDLQESNVRLKLTIVSTVGFGDQINKED
SYKPIVEFIDAQFEAYLQEELKIRRVL
H
TYHDSRIHVCLYFIAPTGHSLKSLDLVTMKKLDSK
VNIIPIIAKADAISKSELTKFKIKITSELVSNGV
Q
IYQFPTDDESVAEINGTMN
AHLPFAVIGSTEELKIGNKMMRARQYPWGTVQVENEAHCDFVKLREMLIR
V
NMEDLREQTHTRHYELYRRCKLEEMGFKDTDPDSKPF
SLQETYEAKRNEFLGELQKKEEEMRQMFVQRV
K
EKEAELKEAEKE
LHEKFDRLKKLHQDEKKKLEDKKKSLDDEVNAFKQRKTAAELLQSQGSQAGGSQTLK
R
DKEKK
NFF



Links Key
 Links to:   History report
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 Genome Browser Links:   Ensembl Genome Browser
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