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Report for CCDS14585.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14585.1 Public Homo sapiens X SEPTIN6 24 110 108 CCDS HistoryNCBI Gene:23157Re-query CCDS DB by CCDS ID:14585.1Re-query CCDS DB by GeneID:23157See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14585.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360156.11 ENSP00000353278.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000360156.11Link to Ensembl Protein Viewer:ENSP00000353278.7Re-query CCDS DB by Nucleotide ID:ENST00000360156Re-query CCDS DB by Protein ID:ENSP00000353278
Original member Current member EBI ENST00000394610.7 ENSP00000378108.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000394610.7Link to Ensembl Protein Viewer:ENSP00000378108.1Re-query CCDS DB by Nucleotide ID:ENST00000394610Re-query CCDS DB by Protein ID:ENSP00000378108
Original member Current member EBI ENST00000489216.5 ENSP00000418715.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000489216.5Link to Ensembl Protein Viewer:ENSP00000418715.1Re-query CCDS DB by Nucleotide ID:ENST00000489216Re-query CCDS DB by Protein ID:ENSP00000418715
Original member Current member NCBI NM_145799.4 NP_665798.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145799.4Link to Protein Sequence:NP_665798.1Re-query CCDS DB by Nucleotide ID:NM_145799Re-query CCDS DB by Protein ID:NP_665798Link to BLAST:NP_665798.1
Original member Current member NCBI NM_145800.4 NP_665799.1 Accepted alive Link to Nucleotide Sequence:NM_145800.4Link to Protein Sequence:NP_665799.1Re-query CCDS DB by Nucleotide ID:NM_145800Re-query CCDS DB by Protein ID:NP_665799Link to BLAST:NP_665799.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_665798.1 427 Q14141-2 427 100% 0 0
NP_665799.1 427 Q14141-2 427 100% 0 0

Chromosomal Locations for CCDS 14585.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 119625376 119625379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119629318 119629508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119633360 119633492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119637027 119637195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119640692 119640788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119649937 119650098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119652854 119653040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119663482 119663677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119675554 119675668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119693076 119693105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1284 nt):
ATGGCAGCGACCGATATAGCTCGCCAGGTGGGTGAAGGTTGCCGAACTGTCCCCCTGGCTGGACATGTGG
GGTTTGACAGCTTGCCTGACCAGCTGGTGAATAAGTCCGTCAGCCAGGGCTTCTGCTTCAACATCCTGTG
CGTGGGAGAGACAGGTTTGGGCAAGTCCACCCTCATGGACACCCTGTTCAACACCAAATTCGAAGGGGAG
CCAGCCACCCACACACAGCCGGGTGTCCAGCTCCAGTCTAATACCTATGACCTCCAAGAGAGCAACGTGA
GGCTAAAGCTCACGATCGTTAGCACAGTTGGCTTTGGGGACCAGATCAACAAAGAGGACAGCTACAAGCC
TATCGTGGAATTCATCGATGCACAATTCGAGGCCTACCTGCAGGAAGAGCTAAAGATCCGAAGAGTGCTA
CACACCTACCATGACTCCCGAATCCATGTCTGCTTGTATTTCATTGCCCCCACGGGTCATTCCCTGAAGT
CTCTGGACCTAGTGACTATGAAGAAGCTGGACAGTAAGGTGAACATCATCCCCATCATTGCCAAAGCAGA
TGCCATTTCGAAGAGTGAGCTAACAAAGTTCAAAATCAAAATCACCAGCGAGCTTGTCAGCAACGGAGTC
CAGATCTATCAGTTTCCTACAGATGATGAGTCGGTGGCAGAGATCAATGGAACCATGAACGCCCACCTGC
CGTTTGCTGTCATTGGCAGCACAGAAGAACTGAAGATAGGCAACAAGATGATGAGGGCGCGGCAGTATCC
TTGGGGCACTGTGCAGGTTGAAAACGAGGCCCACTGCGACTTTGTGAAGCTGCGGGAGATGCTGATTCGG
GTCAACATGGAGGATCTGCGGGAGCAGACCCACACCCGGCACTATGAGCTGTATCGCCGCTGTAAGCTGG
AGGAGATGGGCTTCAAGGACACCGACCCTGACAGCAAACCCTTCAGTTTACAGGAGACATATGAGGCCAA
AAGGAACGAGTTCCTAGGGGAACTCCAGAAAAAAGAAGAGGAGATGAGACAGATGTTCGTCCAGCGAGTC
AAAGAGAAAGAAGCGGAGCTCAAAGAGGCAGAGAAAGAGCTGCACGAGAAGTTTGACCGTCTGAAGAAAC
TGCACCAGGACGAGAAGAAGAAACTGGAGGATAAGAAGAAATCCCTGGATGATGAAGTGAATGCTTTCAA
GCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCCCAGGGCTCCCAGGCTGGAGGCTCACAGACTCTGAAG
AGAGACAAAGAGAAGAAAAATTAA

Translation (427 aa):
MAATDIARQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKFEGE
PATHTQPGVQLQSNTYDLQESNVRLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFEAYLQEELKIRRVL
HTYHDSRIHVCLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADAISKSELTKFKIKITSELVSNGV
QIYQFPTDDESVAEINGTMNAHLPFAVIGSTEELKIGNKMMRARQYPWGTVQVENEAHCDFVKLREMLIR
VNMEDLREQTHTRHYELYRRCKLEEMGFKDTDPDSKPFSLQETYEAKRNEFLGELQKKEEEMRQMFVQRV
KEKEAELKEAEKELHEKFDRLKKLHQDEKKKLEDKKKSLDDEVNAFKQRKTAAELLQSQGSQAGGSQTLK
RDKEKKN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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