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Report for CCDS14820.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14820.1 Public Mus musculus 1 Sulf1 23 108 98 CCDS HistoryNCBI Gene:240725Re-query CCDS DB by CCDS ID:14820.1Re-query CCDS DB by GeneID:240725See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14820.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000088585.9 ENSMUSP00000085949.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000088585.9Link to Ensembl Protein Viewer:ENSMUSP00000085949.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000088585Re-query CCDS DB by Protein ID:ENSMUSP00000085949
Original member Current member EBI ENSMUST00000180062.7 ENSMUSP00000136014.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000180062.7Link to Ensembl Protein Viewer:ENSMUSP00000136014.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000180062Re-query CCDS DB by Protein ID:ENSMUSP00000136014
Original member Current member EBI ENSMUST00000177608.7 ENSMUSP00000137523.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000177608.7Link to Ensembl Protein Viewer:ENSMUSP00000137523.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000177608Re-query CCDS DB by Protein ID:ENSMUSP00000137523
Original member NCBI NM_001198565.1 NP_001185494.1 Updated not alive Link to Nucleotide Sequence:NM_001198565.1Link to Protein Sequence:NP_001185494.1Re-query CCDS DB by Nucleotide ID:NM_001198565Re-query CCDS DB by Protein ID:NP_001185494
Current member NCBI NM_001198565.2 NP_001185494.1 Accepted alive Link to Nucleotide Sequence:NM_001198565.2Link to Protein Sequence:NP_001185494.1Re-query CCDS DB by Nucleotide ID:NM_001198565Re-query CCDS DB by Protein ID:NP_001185494Link to BLAST:NP_001185494.1
Original member NCBI NM_001198566.1 NP_001185495.1 Updated not alive Link to Nucleotide Sequence:NM_001198566.1Link to Protein Sequence:NP_001185495.1Re-query CCDS DB by Nucleotide ID:NM_001198566Re-query CCDS DB by Protein ID:NP_001185495
Current member NCBI NM_001198566.2 NP_001185495.1 Accepted alive Link to Nucleotide Sequence:NM_001198566.2Link to Protein Sequence:NP_001185495.1Re-query CCDS DB by Nucleotide ID:NM_001198566Re-query CCDS DB by Protein ID:NP_001185495Link to BLAST:NP_001185495.1
Original member NCBI NM_172294.1 NP_758498.1 Updated not alive Link to Nucleotide Sequence:NM_172294.1Link to Protein Sequence:NP_758498.1Re-query CCDS DB by Nucleotide ID:NM_172294Re-query CCDS DB by Protein ID:NP_758498
Current member NCBI NM_172294.2 NP_758498.1 Accepted alive Link to Nucleotide Sequence:NM_172294.2Link to Protein Sequence:NP_758498.1Re-query CCDS DB by Nucleotide ID:NM_172294Re-query CCDS DB by Protein ID:NP_758498Link to BLAST:NP_758498.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001185494.1 870 Q8K007 870 100% 0 0
NP_001185495.1 870 Q8K007 870 100% 0 0
NP_758498.1 870 Q8K007 870 100% 0 0

Chromosomal Locations for CCDS 14820.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 12786527 12786698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12796766 12797005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12805180 12805331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12807854 12808023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12817338 12817488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12818378 12818553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12820401 12820529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12820795 12820851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12821970 12822099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12836113 12836329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12838359 12838611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12839829 12839925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12840403 12840497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12841443 12841508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12842649 12842824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12848095 12848237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12848331 12848454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12850760 12850793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12858812 12858842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2613 nt):
ATGAAGTATTCCCTCTGGGCTCTGCTGCTTGCCGTGCTGGGCACACAGCTGCTGGGAAGCCTGTGTTCCA
CCGTTCGGTCCCAGAGGTTCCGAGGAAGGATACAGCAGGAACGAAAAAACATCAGACCCAATATTATCCT
TGTGCTCACTGACGACCAGGATGTGGAGCTGGGTTCCCTGCAAGTCATGAACAAGACGAGAAAGATCATG
GAACAGGGTGGGGCCACCTTCACCAATGCCTTTGTGACCACGCCCATGTGCTGTCCATCACGCTCATCCA
TGCTCACTGGGAAGTACGTGCATAACCACAATGTCTACACCAACAATGAGAACTGCTCGTCTCCCTCGTG
GCAGGCAATGCACGAGCCTCGGACCTTTGCTGTGTATCTCAACAACACCGGCTACAGAACAGCCTTTTTT
GGAAAATACCTCAATGAATACAATGGCAGCTACATCCCTCCTGGATGGCGAGAATGGCTCGGATTAATCA
AGAATTCTCGTTTCTATAATTACACTGTTTGTCGCAACGGCATCAAGGAGAAGCATGGATTTGATTATGC
AAAGGATTACTTCACAGACTTAATCACTAACGAGAGCATTAATTACTTCAAAATGTCTAAGAGAATGTAT
CCCCATAGGCCCATTATGATGGTGATCAGCCATGCAGCACCACATGGCCCTGAAGACTCCGCCCCACAGT
TTTCAAAACTGTACCCCAATGCCTCCCAACACATAACACCCAGCTATAACTATGCACCGAACATGGACAA
ACACTGGATCATGCAGTACACAGGGCCCATGTTGCCTATCCACATGGAGTTCACCAACGTCCTCCAGCGC
AAACGACTGCAGACTCTGATGTCAGTTGACGACTCTGTCGAGAGGTTGTACAACATGCTTGTGGAGAGCG
GGGAGCTGGACAACACTTACATCATCTACACTGCGGACCACGGCTACCACATTGGACAGTTTGGGCTGGT
CAAGGGGAAATCCATGCCCTACGACTTTGACATCCGTGTGCCTTTCTTCATTCGTGGTCCAAGCATAGAA
CCAGGGTCGATAGTCCCACAGATTGTTCTGAACATCGACCTAGCTCCTACCATTCTGGATATTGCTGGTC
TTGACTCTCCTTCTGATGTGGATGGTAAATCTGTCCTCAAACTTCTAGACCTGGAAAAGCCGGGTAACAG
GTTTCGGACAAACAAGAAGGCCAAAATCTGGCGTGATACATTCCTAGTGGAAAGAGGGAAATTTTTACGG
AAGAAGGAGGAATCCGGCAAGAATATCCAACAGTCAAACCACTTGCCCAAATATGAGAGGGTCAAGGAAC
TGTGCCAGCAAGCCAGATACCAGACAGCCTGTGAGCAGCCTGGGCAGAACTGGCAGTGCATCGAGGACAC
ATCCGGCAAGCTCCGAATCCACAAGTGTAAGGGACCCAGCGACCTGCTCACGGTCCGTCAGAATGCACGC
AACCTCTACTCTCGCGGATTGCATGACAAAGACAAAGAGTGCCATTGTAGGGACTCTGGCTATCGCTCGA
GCAGAAGCCAGAGAAAGAATCAAAGGCAGTTCCTGAGGAACAAGGGAACACCAAAGTATAAGCCCAGATT
TGTGCACACCCGGCAGACTCGGTCCCTGTCTGTTGAATTCGAAGGTGAAATATATGACATCAACCTGGAA
GAAGAAGAACTGCAAGTGTTACCACCAAGGAGCATTGCCAAGCGCCATGATGAGGGTCACCAGGGCTTCA
TTGGCCACCAGGCTGCTGCTGGTGACATCAGGAATGAGATGTTGGCAGACAGCAACAATGCTGTGGGGTT
ACCCGCCACTGTCCGGGTGACACACAAGTGCTTTATTCTTCCAAACGACACAATCCACTGTGAGAGGGAG
CTGTACCAGTCAGCCAGAGCGTGGAAGGACCATAAGGCCTACATTGATAAAGAGATTGAAGTTCTACAAG
ATAAAATTAAGAATTTAAGGGAAGTGAGGGGACACCTAAAGAAAAGGAAACCTGAGGAGTGTGGCTGTGG
TGACCAGAGCTATTACAACAAAGAGAAAGGTGTCAAACGACAGGAGAAGCTAAAGAGTCACCTTCACCCC
TTCAAGGAGGCTGCTGCCCAGGAGGTGGATAGCAAACTTCAGCTCTTCAAGGAGCATCGGAGGAGGAAGA
AGGAGAGGAAGGAGAAGAAACGGCAGAGGAAGGGAGAGGAGTGTAGCCTGCCTGGCCTTACCTGCTTCAC
CCATGACAACAACCACTGGCAGACTGCCCCATTCTGGAACTTGGGATCTTTCTGTGCCTGCACAAGTTCT
AACAACAATACCTACTGGTGTTTGCGTACAGTCAACGAGACGCACAATTTCCTGTTTTGTGAGTTTGCTA
CTGGCTTTCTGGAATATTTCGACATGAATACGGATCCTTATCAGCTCACAAATACAGTACACACAGTAGA
ACGGAGCATCTTAAATCAGCTACACATACAGCTGATGGAGCTCCGAAGCTGCCAAGGGTATAAACAGTGC
AACCCAAGACCCAAGAGCCTGGACATTGGAGCTAAAGAAGGAGGAAACTATGACCCGCACAGAGGACAGT
TATGGGATGGATGGGAAGGTTAG

Translation (870 aa):
MKYSLWALLLAVLGTQLLGSLCSTVRSQRFRGRIQQERKNIRPNIILVLTDDQDVELGSLQVMNKTRKIM
EQGGATFTNAFVTTPMCCPSRSSMLTGKYVHNHNVYTNNENCSSPSWQAMHEPRTFAVYLNNTGYRTAFF
GKYLNEYNGSYIPPGWREWLGLIKNSRFYNYTVCRNGIKEKHGFDYAKDYFTDLITNESINYFKMSKRMY
PHRPIMMVISHAAPHGPEDSAPQFSKLYPNASQHITPSYNYAPNMDKHWIMQYTGPMLPIHMEFTNVLQR
KRLQTLMSVDDSVERLYNMLVESGELDNTYIIYTADHGYHIGQFGLVKGKSMPYDFDIRVPFFIRGPSIE
PGSIVPQIVLNIDLAPTILDIAGLDSPSDVDGKSVLKLLDLEKPGNRFRTNKKAKIWRDTFLVERGKFLR
KKEESGKNIQQSNHLPKYERVKELCQQARYQTACEQPGQNWQCIEDTSGKLRIHKCKGPSDLLTVRQNAR
NLYSRGLHDKDKECHCRDSGYRSSRSQRKNQRQFLRNKGTPKYKPRFVHTRQTRSLSVEFEGEIYDINLE
EEELQVLPPRSIAKRHDEGHQGFIGHQAAAGDIRNEMLADSNNAVGLPATVRVTHKCFILPNDTIHCERE
LYQSARAWKDHKAYIDKEIEVLQDKIKNLREVRGHLKKRKPEECGCGDQSYYNKEKGVKRQEKLKSHLHP
FKEAAAQEVDSKLQLFKEHRRRKKERKEKKRQRKGEECSLPGLTCFTHDNNHWQTAPFWNLGSFCACTSS
NNNTYWCLRTVNETHNFLFCEFATGFLEYFDMNTDPYQLTNTVHTVERSILNQLHIQLMELRSCQGYKQC
NPRPKSLDIGAKEGGNYDPHRGQLWDGWEG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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